Table 2.
No. | Mean depth | Mean mutations per nucleotide | Variance in mutations per nucleotide | Variance/mean |
1 | 1,783.71 | 1.6449E-03 | 1.6422E-03 | 0.9984 |
19,453.23 | 1.4611E-02 | 1.8267E-02 | 1.2503 | |
2 | 1,134.24 | 1.9355E-03 | 1.9318E-03 | 0.9981 |
21,986.85 | 1.8484E-02 | 3.4788E-02 | 1.8820 | |
3 | 2,131.11 | 1.2575E-03 | 1.2559E-03 | 0.9987 |
20,897.13 | 1.2091E-02 | 1.4073E-02 | 1.1639 | |
4 | 890.51 | 1.0647E-03 | 1.2571E-03 | 1.1808 |
11,902.35 | 1.7809E-02 | 2.8525E-02 | 1.6018 | |
5 | 1,285.00 | 1.2581E-03 | 1.2565E-03 | 0.9987 |
16,433.63 | 9.5810E-03 | 1.6070E-02 | 1.6773 |
For low and high depth data points, left to right: the mean depth of sequencing, the mean number of mutations detected per nucleotide averaged across the DNA polymerase delta and epsilon capture set, the variance associated with the mean number of nucleotides, and the variance/mean ratio are given. The variance/mean ratio near 1 is characteristic of the Poisson distribution. Data for intermediate depths are similar.