Antibodies |
Mouse anti-beta3-tubulin |
Millipore Sigma |
T8660; RRID:AB_477590 |
Rabbit anti-TPP1 |
Abcam |
Ab96498, RRID; AB_10680725 |
Mouse αnti-Myc, clone 4A6 |
EMD Millipore |
05724, RRID; AB_309938 |
Rabbit monoclonal anti-Isl1 |
Abcam |
Ab109517, RRID; AB_10866454 |
Mouse anti-MAP2A,2B |
EMD Millipore |
MAB378, RRID; AB_94967 |
Bacterial and Virus Strains |
CMV-mitoDSred LV |
Orian Shririhai, UCLA |
N/A |
Synapsin-mitoDSred LV |
This study |
N/A |
pTet-O-Ngn2-puro |
Zhang et al., 2013 |
https://www.addgene.org/52047/ |
Tet-O-FUW-EGFP |
Vierbuchen et al., 2010 |
https://www.addgene.org/30130/ |
FUW-M2rtTA |
Hockemeyer et al., 2008 |
https://www.addgene.org/20342/ |
Chemicals, Peptides, and Recombinant Proteins |
Biomol ICCBL – 2012 library (480) |
ICCB-Longwood |
https://iccb.med.harvard.edu/biomol-iccb-l-known-bioactives-2012 |
Selleck Bioactive compound library (1,902) |
ICCB-Longwood |
https://iccb.med.harvard.edu/selleck-bioactive-compound-library |
Calcimycin |
Millipore Sigma |
A23187 |
Latrunculin B |
Tocris |
Cat # 3974 |
Latrunculin A |
Tocris |
Cat # 3973 |
Cytochalasin B |
Tocris |
Cat # 5474 |
Ala-Ala-Phe-CMK |
Enzo |
BML-PI123-0025 |
BMS-754807 |
Selleck Chemicals |
Cat # S1124 |
Hesperadin |
Selleck Chemicals |
Cat # S1529 |
TAK-901 |
Selleck Chemicals |
Cat # S2718 |
Barasertib |
Selleck Chemicals |
Cat # S1147 |
Paclitaxel |
Tocris |
Cat# 1097 |
24(S)-Hydroxycholesterol |
Millipore Sigma |
Cat # SML1648 |
Butabindide oxalate |
Tocris |
Cat# 1323 |
Carfilzomib (PR-171) |
Selleck Chemicals |
Cat # S2853 |
Y-27632(ROCK inhibitor) |
Cayman Chemicals |
Cat# 10005583 |
Tetramethylrhodamine, methyl ester |
ThermoFisher |
Cat #T668 |
Deposited Data |
Primary screen data were deposited at GitHub |
This study |
https://github.com/ThomasSchwarzLab/ScreeningData_Shlevkov_CellReports_2019 |
Experimental Models: Cell Lines |
HEK293T |
ATCC |
ATCC CRL-3216, RRID:CVCL_0063 |
GON0515-03 #5 iPSC line |
This study |
N/A |
39b SOD+/A4V iPSC line |
Wainger et al., 2014 |
N/A |
39b SOD+/+ iPSC line |
Wainger et al., 2014 |
N/A |
Experimental Models: Organisms/Strains |
Syntaphilin KO mouse |
Kang et al., 2008 |
N/A |
Oligonucleotides |
Primer AurkB K106R (forward): GTGGCGTCAGGGTCCTCTTG |
This study |
N/A |
Primer AurkB K106R (reverse): GATGAAATGGCTTTTCTTCTCCC |
This study |
N/A |
Primer synapsin-mitoDSred Lenti (forward): GCCTGAGAGCGCAGTAGCGCTACCGGACTCAGA |
This study |
N/A |
Primers for synapsin-mitoDSred Lenti (reverse): CCGCTAGCTTCGAAGATTATGATCTAGAGTCGCGGC |
This study |
N/A |
Recombinant DNA |
Mito-DsRed (pDsRed2-Mito) |
G. Hajnoczky, Thomas Jefferson University |
N/A |
GFP-rab7 WT |
Choudhury et al., 2002 |
Addgene #12605 |
pLV-CMV-mitoDSred |
This study |
N/A |
pLV-Synapsin-mitoDSred |
This study |
N/A |
pGFP-C-shLenti-Tpp1 (rat) |
OriGene |
TL711322 |
pCMV6-Myc-DDK-Tpp1 (human) |
OriGene |
RC204471 |
pGFP-C-shLenti-Tpp2 (rat) |
OriGene |
TL711260 |
pGFP-C-shLenti-Aurkb (rat) |
OriGene |
TL712117 |
pCMV6-Myc-DDK-Aurkb (human) |
OriGene |
RC210288 |
pCMV6-Myc-DDH-AurkBK106R (kinase dead) |
This study |
N/A |
pGFP-C-shLenti-Aurka (rat) |
OriGene |
TL320538 |
Software and Algorithms |
ImageJ |
Schneider et al., 2012 |
https://imagej.nih.gov/ij/ |
MATLAB® |
MathWorks |
https://www.mathworks.com |
CellProfiler |
Carpenter et al., 2006 |
https://cellprofiler.org |
R |
R Core Team, 2014 |
https://www.R-project.org |
GraphPad Prism v6.0 |
GraphPad Software |
https://www.graphpad.com |
Other |
Cell Profiler pipeline for motility analysis and PATHS: MATLAB-based code for processing of Cell Profiler data for motility analysis, deposited at GitHub |
This study |
https://github.com/ThomasSchwarzLab/ArrayScanCodes |