Table 2.
Summary of down-regulated differentially expressed genes in WT VS oxs2-1 comparison group identified by qPCR (less than 2 fold).
| DEG Number | GeneID | Log2 Ratio WT VS oxs2-1 | Fold Change WT VS oxs2-1 | Results of blast against nr database | TAIR Annotation (Key Words) | |
|---|---|---|---|---|---|---|
| DEG2 | AT3G44006 | −5.2148 | 0.026927463 | hypothetical protein | This gene encodes a small protein and has either evidence of transcription or purifying selection. | |
| DEG3 | AT4G29200 | −4.8655 | 0.034304627 | Beta-galactosidase related protein | Beta-galactosidase related protein | |
| DEG4 | AT4G34790 | −3.6286 | 0.080848939 | SAUR-like auxin-responsive protein family | response to auxin | |
| DEG5 | AT3G05945 | −2.5701 | 0.168388441 | |||
| DEG6 | AT3G30720 | −1.5808 | 0.334298315 | qua-quine starch | negative regulation of starch metabolic process, positive regulation of protein metabolic process, starch biosynthetic process | |
| DEG10 | AT3G01500 | −1.3002 | 0.406068198 | α, β | carbonic anhydrase 1 | carbon utilization, defense response to bacterium, defense response to fungus, incompatible interaction, negative regulation of stomatal complex development, photosynthesis, regulation of stomatal movement, response to carbon dioxide, response to cold |
| DEG12 | AT5G14740 | −1.1985 | 0.435715601 | β | carbonic anhydrase 2 | carbon utilization, defense response to bacterium, regulation of stomatal movement, response to carbon dioxide |
| DEG13 | AT3G27690 | −1.1934 | 0.437262295 | α | photosystem II light harvesting complex protein 2.3 | response to blue light, response to cold, response to desiccation, response to far red light, response to high light intensity, response to light stimulus, response to low light intensity stimulus, response to red light |
| DEG18 | AT4G12980 | −1.1046 | 0.465026703 | χ | Auxin-responsive family protein | multicellular organism development, oxidation-reduction process |
| DEG19 | AT5G25980 | −1.0972 | 0.467436341 | β, δ | glucoside glucohydrolase 2 | abscisic acid-activated signaling pathway, carbohydrate metabolic process, defense response to insect, glucosinolate catabolic process, regulation of stomatal movement, response to abscisic acid, response to salt stress |
| DEG24 | AT5G38420 | −1.0376 | 0.487144309 | α, β, χ | Ribulose bisphosphate carboxylase (small chain) family protein | carbon fixation, oxidation-reduction process, photorespiration, reductive pentose-phosphate cycle, response to blue light, response to far red light, response to red light |
| DEG25 | AT1G29395 | −1.0314 | 0.489218757 | δ | COLD REGULATED 314 INNER MEMBRANE 1 | cellular response to cold, cellular response to water deprivation, cold acclimation, response to abscisic acid |
| DEG28 | AT3G05727 | −1.0069 | 0.497612635 | S locus-related glycoprotein 1 (SLR1) binding pollen coat protein family | defense response to fungus, killing of cells of other organism |
α: description of photosynthesis, β: description of carbon metabolism, χ: description of oxidation-reduction process, δ: description of response to ABA.