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. 2019 Nov 19;294(52):19997–20008. doi: 10.1074/jbc.RA119.011367

Table 1.

sRNA candidates that interact with rbn mRNA

sRNA Size Position of base pairing on rbna Energyb Expressionc Refs.
nt kcal
RyjB 90 796–818 −15.7 E > S 43
RseX 91 581–613 −15.6 Unknown 44
GcvB 205 76–125 −13.3 E > S 24
GlmZ 172 254–282 −12.6 E > S 24
RprA 105 1055–1097 −11.8 S > E 24, 45
RyeB 121 496–544 −9.6 S > E 45
SraB 169 52–98 −9.2 S > E 24
SroB 82 29–44 −8.5 S > E 46
Spf 109 582–594 −7.8 E > S 47

a Transcription start site is position 1. Coding region begins at position 27.

b Position of base pairing and the energy of rbn-sRNA hybrid are predicted by IntaRNA.

c Expression is based on published data. E is exponential phase, and S is stationary phase.