Table 1.
Inhibitor | k1 (M−1s−1) | SD | k3 (s−1) | SD | k4 (M−1s−1) | SD | k5 (s−1) | SD | Ki (nM) | SD |
---|---|---|---|---|---|---|---|---|---|---|
EapH1 WTb | 6.0×105 | 2.2×105 | 7.4 | 0.8 | 2.0×106 | 1.4×105 | 4.3×10−5 | 1.3×10−5 | 0.021 | 0.005 |
EapH2 WT | 3.1×105 | 4.5×104 | 7.8 | 0.2 | 2.9×105 | 4.3×104 | 5.9×10−4 | 2.1×10−5 | 2.11 | 0.32 |
H1 R89Mb,c | - | - | 7.0 | 0.1 | - | - | 321 | 12 | ||
H2 R90M | 2.4×105 | 1.3×105 | 7.2 | 1.7 | 2.8×105 | 1.3×105 | 5.5×10−4 | 4.1×10−5 | 2.3 | 1 |
H1 L59Fc | - | - | 6.3 | 0.3 | - | - | 200 | 5 | ||
H2 K120M | 3.2×105 | 5.5×104 | 8.3 | 1.1 | 2.6×105 | 1.1×105 | 8.3×10−4 | 1.8×10−5 | 3.8 | 2.0 |
H2 K121M | 4.3×105 | 2.3×105 | 7.0 | 0.7 | 3.3×105 | 6.6×104 | 9.1×10−4 | 6.9×10−5 | 2.9 | 0.7 |
H2 D122N | 3.5×105 | 4.6×104 | 7.9 | 1.5 | 2.6×105 | 5.8×104 | 3.7×10−4 | 1.6×10−5 | 1.5 | 0.4 |
H2 D122A | 6.9×105 | 5.0×105 | 8.3 | 2.3 | 1.2×105 | 1.5×104 | 3.1×10−3 | 1.2×10−4 | 26 | 3 |
H2 S123A | 1.9×105 | 5.4×104 | 6.6 | 0.5 | 1.6×105 | 7.8×104 | 4.1×10−4 | 2.6×10−5 | 3.2 | 2.1 |
H2 Y124F | 5.5×105 | 1.3×105 | 8.4 | 0.2 | 1.2×105 | 3.8×104 | 2.2×10−3 | 5.1×10−5 | 18.6 | 4.9 |
H2 T125Ac | - | - | 6.2 | 0.2 | - | - | 53 | 4 | ||
H1 N126A | 2.4×105 | 6.4×104 | 6.3 | 0.5 | 9.5×105 | 5.0×105 | 1.0×10−4 | 2.5×10−5 | 0.166 | 0.163 |
H2 N127Ac | - | - | 5.8 | 0.5 | - | - | 397 | 66 | ||
(-)b,d | 4.0×105 | 2.2×105 | 7.4 | 0.8 | - | - | - |
Microscopic rate constant estimates are the average of at least three individual sets of 57 progress curves (three [elastase], three [substrate] per [elastase], and five [inhibitor] per [substrate].
values previously determined by Herdendorf and Geisbrecht.3
Due to the loss of the time-dependent inhibition characteristic, these mutants were analyzed by a classical 5×5 inhibition assay. The data (n = 3) were globally fit to a competitive inhibition model using SigmaPlot 10.0/Enzyme Kinetics Module 1.3 (Systat Software, Inc). The Ki estimates reported are an average of three individual data sets. Errors reported are the standard deviation. k4 and k5 were estimated by following the EapH2 mutants binding to immobilized elastase using surface plasmon resonance (See Table 2).
Microscopic rate constant estimates are the average of 10 individual sets of 12 progress curves (two [elastase], six [substrate] per [elastase].