Table 1.
Summary of the identified miRNAs from passion fruit
| Identified miRNAs | LM (nt) | Query miRNAs | miRNA sequences | Accession | Location | LP (nt) | GC % | MFEs (ΔG) | MFEI |
|---|---|---|---|---|---|---|---|---|---|
| ped-miR156a-5p | 20 | ath-miR156a-5p | UGACAGAAGAGAGUGAGCAC | MUZT01071036.1 | 5′ | 82 | 47.56 | – 51.10 | 1.31 |
| ped-miR157a-5p | 21 | ath-miR157a-5p | UUGACAGAAGAUAGAGAGCAC | MUZT01093399.1 | 5′ | 84 | 40.48 | – 42.90 | 1.26 |
| ped-miR160c-5p | 21 | ath-miR160c-5p | UGCCUGGCUCCCUGUAUGCCA | MUZT01072383.1 | 5′ | 79 | 58.23 | – 43.50 | 0.94 |
| ped-miR162a | 22 | ath-miR162a-5p | UGGAGGCAGCGGUUCAUCGAUC | MUZT01067906.1 | 5′ | 81 | 48.15 | – 28.50 | 0.73 |
| ped-miR164b-5p | 21 | ath-miR164b-5p | UGGAGAAGCAGGGCACGUGCA | MUZT01048418.1 | 3′ | 195 | 44.10 | – 60.40 | 0.70 |
| ped-miR166a-5p | 21 | gma-miR166a-5p | GGAAUGUUGUCUGGCUCGAGG | MUZT01089702.1 | 5′ | 131 | 45.80 | – 56.80 | 0.94 |
| ped-miR166b-3p | 21 | ath-miR166b-3p | UCGGACCAGGCUUCAUUCCCC | MUZT01068357.1 | 3′ | 80 | 48.75 | – 44.90 | 1.15 |
| ped-miR166h-3p | 21 | gma-miR166h-3p | UCUCGGACCAGGCUUCAUUCC | MUZT01172784.1 | 3′ | 88 | 45.45 | – 39.20 | 0.98 |
| ped-miR166h-5p | 21 | gma-miR166h-5p | GGAAUGUUGUUUGGCUCGAGG | MUZT01069089.1 | 5′ | 125 | 37.60 | – 44.50 | 0.94 |
| ped-miR167e | 21 | gma-miR167e | UGAAGCUGCCAGCAUGAUCUU | MUZT01041392.1 | 5′ | 67 | 44.78 | – 35.80 | 1.19 |
| ped-miR169a | 21 | gma-miR169a | CAGCCAAGGAUGACUUGCCGG | MUZT01219929.1 | 5′ | 179 | 43.58 | – 66.30 | 0.84 |
| ped-miR169b | 21 | gma-miR169b | CAGCCAAGGAUGACUUGCCGA | MUZT01009503.1 | 5′ | 99 | 46.46 | – 39.40 | 0.85 |
| ped-miR171b-3p | 21 | ath-miR171b-3p | UUGAGCCGUGCCAAUAUCACG | MUZT01091311.1 | 3′ | 84 | 44.05 | – 38.40 | 1.03 |
| ped-miR171j-3p | 21 | gma-miR171j-3p | UGAUUGAGCCGUGCCAAUAUC | MUZT01028930.1 | 3′ | 77 | 37.66 | – 37.80 | 1.30 |
| ped-miR171k-5p | 21 | gma-miR171k-5p | CGAUGUUGGUGAGGUUCAAUC | MUZT01137815.1 | 5′ | 79 | 46.84 | – 29.10 | 0.78 |
| ped-miR172b | 21 | vvi-miR172b | UGAAUCUUGAUGAUGCUACAC | MUZT01049317.1 | 3′ | 120 | 47.50 | – 42.20 | 0.74 |
| ped-miR319b | 21 | ath-miR319b | UUGGACUGAAGGGAGCUCCCU | MUZT01035900.1 | 3′ | 171 | 46.20 | – 74.80 | 0.94 |
| ped-miR319l | 22 | gma-miR319l | UUGGACUGAAGGGAGCUCCUUC | MUZT01112275.1 | 3′ | 185 | 46.49 | – 79.40 | 0.92 |
| ped-miR319p | 21 | gma-miR319p | UUUUGGACUGAAGGGAGCUCC | MUZT01179548.1 | 3′ | 76 | 47.37 | – 32.80 | 0.91 |
| ped-miR393a-5p | 22 | ath-miR393a-5p | UCCAAAGGGAUCGCAUUGAUCC | MUZT01078953.1 | 5′ | 64 | 46.88 | – 33.10 | 1.10 |
| ped-miR394a-5p | 20 | gma-miR394a-5p | UUGGCAUUCUGUCCACCUCC | MUZT01119677.1 | 5′ | 78 | 50.00 | – 33.40 | 0.85 |
| ped-miR395a | 21 | gma-miR395a | CUGAAGUGUUUGGGGGAACUC | MUZT01200730.1 | 3′ | 88 | 51.14 | – 50.20 | 1.11 |
| ped-miR397a | 21 | ath-miR397a | UCAUUGAGUGCAGCGUUGAUG | MUZT01096698.1 | 5′ | 79 | 51.90 | – 39.50 | 0.96 |
| ped-miR398d | 21 | gma-miR398d | UGUGUUCUCAGGUCGCCCCUG | MUZT01004242.1 | 3′ | 102 | 50.00 | – 42.30 | 0.82 |
| ped-miR399d | 21 | ath-miR399d | UGCCAAAGGAGAUUUGCCCCG | MUZT01051618.1 | 3′ | 102 | 49.02 | – 55.30 | 1.10 |
| ped-miR399e | 21 | gma-miR399e | UGCCAAAGGAGAUUUGCCCAG | MUZT01038065.1 | 3′ | 102 | 45.10 | – 35.80 | 0.77 |
| ped-miR399i | 21 | gma-miR399i | UGCCAAAGGAGAAUUGCCCUG | MUZT01092893.1 | 5′ | 60 | 45.00 | – 24.80 | 0.91 |
| ped-miR828b | 22 | gma-miR828b | UCUUGCUCAAAUGAGUAUUCCA | MUZT01146558.1 | 5′ | 123 | 39.84 | – 42.70 | 0.87 |
LM length of mature miRNAs, LP length of precursor