Chung et al. J Histochem Cytochem. (2018); 66(2):121–135 |
10% NBF, 70% ethanol, buffered ethanol (BE70) |
Mouse tissues |
H&E, IHC, Western Blot, DNA and RNA extraction and quantification, Real Time RT-PCR |
Ethanol-based fixatives show a broader time spectrum than NBF, preserving histomorphological features and quantity and quality of biomolecules from paraffin-embedded tissue. |
Ghoddoosi and Masir J Med Surg Pathol. (2016); 1:2 |
NBF, RCL2 diluted in 100% ethanol, RCL2 diluted in 95% ethanol |
Benign fresh human surgical specimens |
H&E, Perl’s stain, IHC, FISH, SISH, genomic DNA extraction and quantification |
RCL2 is potentially a good substitute for formalin. |
Perry et al. J Histochem Cytochem. (2016); 64(7):425–440 |
10% NBF, 70% ethanol, 70% ethanol + 0.5× phosphate-buffered saline, 70% ethanol + 1% glycerol + 0.5 × PBS, 70% ethanol + 0.5% glacial acetic acid + 0.5 × PBS, 70% ethanol + 1% glycerol + 0.5% glacial acetic acid + 0.5 × PBS, buffered ethanol (BE70) |
Mouse tissues |
H&E, IHC, Western Blot, DNA and RNA extraction and quantification, Real-Time RT-PCR, Multiplex RT-PCR |
BE70 fixative may be a potential replacement for NBF in both research and clinical settings, with the benefit of better biomolecule preservation, without the trade-off of impaired histomorphology. |
Stefanits H. et al. Clin Neuropathol. (2016); 35(1):3–12 |
NBF, RCL2, KINFix |
Neurosurgical biopsy specimens |
Nuclear Magnetic Resonance (NMR) spectroscopy, H&E, Gomori-Trichrome, Alcian blue, Periodic acid Schiff, IHC, DNA and RNA extraction and quantification, PCR, HPLC-MS/ MS |
RCL2 and KINFix offer comparable histomorphology and superior template for molecular analyses than formalin. |
Belloni B. et al. J Clin Pathol. (2013); 66(2):124–135 |
NBF, PAXgene |
Human malignant melanoma biopsy specimens |
H&E, IHC, DNA and extraction and quantification, qRT-PCR, Real-time RT-PCR, Sanger sequencing |
In PAXPE samples, morphology is well preserved but immunohistochemistry requires re-evaluation of markers and staining procedures. PAXPE fixation offers some advantages concerning molecular analysis. |
Chieco C. et al. Biotech Histochem. (2013); 88(2):109–119 |
1. FAA (formalin, acetic acid, 95% ethanol, distilled water, 10:5:50:35, v/v), FineFIX (70% ethanol concentration) 2. 2.5% glutaraldehyde in 0.1 M phosphate buffer; FineFIX (70% ethanol concentration) |
Healthy leaves 1. T. cordata Mill. Tiliaceae, P. avium L. Rosaceae and P. persica (D.C.) C.A. Mey Hamamelidaceae 2. C. australis L. Ulmaceae, U. minor Mill Ulmaceae and G. biloba L. Ginkgoaceae |
1. Light microscopy: Histological staining (toluidine blue) 2. SEM |
FineFIX is a viable alternative to formalin for both histological and SEM studies of vegetative plant tissues. |
Groelz D. et al. Exp Mol Pathol. (2013); 94(1):188–194 |
NBF, PAXgene |
Rat tissues |
H&E, RNA extraction, microcapillary electrophoresis, Real-time RT-PCR |
PAXgene preserves histology similarly to formalin, and does not chemically modify RNA. |
Gündisch S. et al. PLoS One. (2013); 8(3):e60638 |
3.5–3.7% NBF, PAXgene |
Non-malignant and malignant human tissue specimens |
Western Blot, Two-dimensional SDS-PAGE, ELISA |
PAXgene preserves even after prolonged fixation or stabilization times, and is compatible with methods for protein analysis. |
Milcheva et al. Acta Histochem. (2013); 115(3):279–289 |
10% NBF, ethanol + glacial acetic acid (EtAc), methanol + glacial acetic acid (MetAc) |
Mouse tissues |
H&E, IHC, RNA and extraction and quantification, quantitative real-time PCR analysis |
Alcohol-based fixatives are an excellent tool for storage of tissue samples designed for IHC and mRNA expression studies. |
Staff S. et al. J Clin Pathol. (2013); 66(9):807–810 |
10% NBF, zinc-based Z7 fixative, RCL2, PAXgene, Allprotect, RNAlater |
Human tissue specimens |
H&E, IHC, DNA and RNA extraction and quantification, qRT-PCR, Real-time RT-PCR, FISH, CISH |
PAXgene provides the best alternative to both liquid nitrogen and formalin, enabling high quality molecular analyses, IHC and sufficient morphological examination. |
References |
Fixative |
Type of tissue |
Techniques |
Main results and comments |
|
Masir et al. Histopathology. (2012); 60(5):804–815 |
10% NBF, RCL2 diluted in 100% ethanol, RCL2 in 95% ethanol |
Benign fresh surgical human specimens |
H&E, Periodic acid-Schiff with diastase, Prussian blue and Masson trichrome, IHC, FISH, SISH, DNA extraction and quantification |
RCL2 is a potential formalin substitute suitable as a fixative for use in routine histopathological examination. |
Turashvili et al. Exp Mol Pathol. (2012); 92(1):33–43 |
10% NBF, Molecular Fixative (MF) |
Non-cancerous human tissues |
H&E, DNA and RNA extraction and quantification, PCR, RT-PCR |
The Molecular Fixative were able to preserve large DNA and RNA fragments in paraffin blocks. |
Zanini et al. Environ Health. (2012); 11:59 |
NBF, Cell-Block, Neo-Fix, RCL2, ZBF, Z7, PAGA, PAGA-T, FineFixx, Carnoy’s fixative, B5 |
Human surgical pathology specimens |
H&E, Giemsa, trichromic stain, Alcian blue, PAS, IHC, RNA extraction and quantification |
These fixatives are suitable for routine use for surgical pathology diagnostic work. |
Arzt L. et al. Exp Mol Pathol. (2011); 91(2):490–495 |
10% NBF, FineFix, RCL-2, HOPE |
Human lung cancer specimens |
H&E, RNA extraction and quantification, miRNA amount, real-time RT-PCR analysis |
Formalin-free fixatives are in general not superior for RNA studies. |
References |
Fixative |
Type of tissue |
Techniques |
Main results and comments |
|
Kap et al. PLoS One. (2011); 6(11):e27704 |
4% NBF, PAXgene |
Human surgical pathology specimens |
H&E, Periodic acid Schiff, resorcin fuchsin, sirius red, Gomori, IHC, CISH |
Results obtained with PAXgene-fixed tissue are comparable to those of formalin-fixed tissue. |
Kothmaier et al. Arch Pathol Lab Med. (2011); 135(6):744–752 |
10% NBF, FineFIX, RCL2, HOPE |
Human lung cancer specimens |
H&E, The Movat pentachrome stain, IHC, protein quantification, Western Blot |
Formalin-free fixatives have the potential in routine pathology and research to replace formalin in histomorphology and protein preservation. |
Moelans C.B. et al Am J Clin Pathol. (2011a),2011b; 136(4):548–56 |
4% NBF, F-solv, FineFIX, RCL2 |
Fresh surgical human tissue specimens |
H&E, periodic acid–Schiff (PAS) without and with diastase (PASD), alcian blue, azan, elastin van Gieson (EvG), and Gordon-Sweet (G&S) and Jones silver stains, IHC |
None of the alcohol-based fixatives was comparable overall to NBF with regard to macroscopy, morphologic examination, and immunohistochemical studies. |
Moelans C.B. et al Am J Clin Pathol. (2011a),2011b; 64(11):960–967 |
4% NBF, F-solv, FineFIX, RCL2 |
Fresh surgical human tissue specimens |
DNA and RNA extraction and quantification, epidermal growth factor receptor sequence analysis, microsatellite instability (MSI), qPCR, CISH, FISH |
FineFIX and RCL2 performed better than F-solv and NBF with regard to DNA and RNA yield, quality and applicability in molecular diagnostics. |
Dotti et al. Diagn Mol Pathol. (2010); 19(2):112–22 |
NBF, methacarn, FineFIX |
Cell line-based model |
RNA extraction and quantification; rRNA and mRNA integrity, Northern Blot, Real-Time RT-PCR |
Alcohol-based fixatives are a good solution for long-term fixation of both cytologic and tissue samples by virtue of their time-independent effects on mRNA preservation. |
Ergin B. et al. J Proteome Res. (2010); 9(10):5188–5196 |
NBF, PAXgene |
Mouse tissues, non-malignant human specimens |
One-dimensional SDS-PAGE, Western blot, reverse-phase protein microarrays (RPPA), MALDI Imaging MS, RNA extraction and quantification, PCR, electrophoresis |
PAXgene has great potential to serve as a novel multimodal fixative for modern pathology, enabling extensive protein biomarker studies on clinical tissue samples. |
Nykänen and Kuopio Exp Mol Pathol. (2010); 88(2):265–271 |
NBF, LN-FIX, FineFIX |
Breast cancer cell lines MCF7 (HTB-22) and T-47D (HTB-133) |
H&E, IHC, RNA extraction and quantification, Real-Time PCR |
Formalin or LN-FIX can be used as a fixative for molecular diagnostics preserving both morphology and nucleic acids; whereas FineFIX proved to be most unsuitable for gene expression analysis. |
Paavilainen L. et al. J Histochem Cytochem. (2010); 58(3):237–246 |
NBF, Glyo-fixx, Zink formalin, FineFIX, HOPE, NEO-FIX, and Zinc-based fixative |
Fresh surgical human tissue specimens, cancer cell lines (RT-4, U-251, PC-3) |
H&E, tissue microarray, IHC, protein concentration, SDS-PAGE, Western-Blot |
Morphological resolution and immunoreactivity were superior in tissues fixed with aldehyde-based fixatives, whereas the use of non-aldehyde–based fixatives can be advantageous in obtaining high protein yield for Western blot analysis. |
Preusser M. et al. Brain Pathol. (2010); 20(6):1010–1020. |
4.5% NBF, RCL2 |
Human brain tumor specimens |
H&E, IHC, DNA and RNA extraction, quantification and quality, multiplex PCR, electrophoresis, quantitative MGMT MSP |
RCL2 fixation does not seem to significantly compromise histological tumor typing or IHC and preserves nucleic acids at a better quality than formalin fixation. |
References |
Fixative |
Type of tissue |
Techniques |
Main results and comments |
|
van Essen H.F. et al. J Clin Pathol. (2010); 63(12):1090–1094 |
4% NBF, RCL2, Boonfix |
Fresh human tissue samples |
IHC |
Tissues fixed in non-crosslinking alcohol based fixatives like RCL2 and Boonfix can successfully be immunohistochemically stained for most antibodies following the usual NBF based protocols. |
Balbi T. et al.Am J Forensic Med Pathol (2009); 30(3):242–245 |
Ethanol-based fixation |
Human tissue section |
SEM |
The details are clearer with respect to those obtainable with formalin fixatives. |
Lassalle et al. Thyroid. (2009); 19(11):1239–1248 |
10% NBF, Glyo-Fixx, FineFIX, ExcellPlus, RCL2, liquid nitrogen |
Human thyroid specimens |
H&E, periodic acid Schiff, trichromic Masson, and Sweet-Gordon staining, IHC, DNA, miRNA and RNA extraction, quantification, integrity |
All the formalin substitute fixatives tested provided good histomorphologic quality for the different stained thyroid tissues, but individually, some fixatives performed better for immunohistochemical and molecular biological procedures for different thyroid pathologies. |
Nassiri et al.BMC Clin Pathol. (2008); 29;8:1 |
10% NBF, UMFIX |
Human breast cancer specimen |
H&E, IHC, FISH, CISH, RNA and DNA extraction, quantification and integrity, PCR |
The formalin-free tissue fixation and processing system is a practical platform for evaluation of biomolecular markers in breast cancer and it allows reliable DNA and RNA and protein studies. |
Lykidis D. et al. Nucleic Acids Res. (2007); 35(12):e85 |
NBF, zinc-based Z2 fixative, HOPE, zinc-based Z7, Z8, Z16, Z17, Z18, Z19 fixatives; replacement of zinc solutions with manganese, magnesium, gallium or vanadium solutions; addition of chemicals to the standard zinc-based (Z2) fixation recipe (Z3, Z4, Z5, Z6, Z9, Z10, Z11, Z12, Z13, Z14, Z15) |
Mouse tissues |
H&E, IHC, DNA and RNA extraction and quantification, PCR, RT-PCR, Real-Time PCR, Real-Time RT-PCR, Two-dimensional (2-D) polyacrylamide gel electrophoresis |
Z7 provides significantly improved preservation of DNA, RNA and proteins and allows improved PCR, Real-Time PCR and protein analysis, which may provide an excellent alternative to NBF for contemporary molecular pathobiology research. |
References |
Fixative |
Type of tissue |
Techniques |
Main results and comments |
|
Cox M.L. et al. Exp Mol Pathol. (2006); 80(2):183–191 |
10% NBF, modified Davidson’s solution II, 70% ethanol, UMFIX, modified Carnoy’s solution, modified methacarn, Bouin’s solution, PBS, 30% sucrose |
Rat tissues |
H&E, RNA extraction and quantification, laser capture microdissection, Taqman qRT-PCR |
Modified methacarn provided the best results and can be considered a fixative of choice where tissue morphology and RNA integrity are being assessed in the same specimens |
Delfour C. et al. J Mol Diagn. (2006); 8(2):157–169 |
4% NBF, FAAM, methacarn solution, RCL2 |
MCF-7 cells, human breast carcinoma specimens |
H&E, IHC, CISH, DNA and RNA extraction, laser capture microdissection, PCR, Real-Time RT-PCR |
Methacarn and RCL2 have great potential for performing both morphological and molecular analyses on the same fixed tissue sample, even after laser-capture microdissection |
Stanta et al. Diagn Mol Pathol. (2006); 15(2):115–123 |
FineFIX |
Human biopsy or surgery tissues |
DNA and RNA extraction, PCR, RT-PCR, Western Blot, two dimensional electrophoresis |
FineFIX fixed tissues preserved DNA and RNA better than formalin. Proteins obtained from FineFIX treated samples are amenable and comparable in quality with those obtained from fresh frozen tissues. |
Nadji M. et al. Appl Immunohistochem Mol Morphol. (2005); 13(3):277–82 |
NBF, UMFIX |
Human neoplastic and non-neoplastic specimens |
IHC |
IHC staining results of tissues fixed in UMFIX and processed by the microwave-assisted system are comparable to those obtained on formalin-fixed, similarly processed specimens. |
Titford and Horenstein Arch Pathol Lab Med. (2005); 129(4):502–506 |
NBF, Glyo-Fixx, STF, Omnifix II, Histochoice, Histofix |
Human surgical pathology specimens |
H&E |
Formalin fixation provided the highest histomorphologic quality for tissue stained with hematoxylin-eosin and examined for diagnostic surgical pathology. |
Uhlig U. et al. Pathol Res Pract. (2004); 200(6):469–472 |
NBF, HOPE |
Human lung cancer |
Western Blot |
HOPE fixation maintains the antigenicity of proteins better than formalin fixation. |
References |
Fixative |
Type of tissue |
Techniques |
Main results and comments |
|
Soukup J. et al. Neoplasma. (2003); 50(4):300–304 |
10% NBF, 75% ethanol, formalin-ethanol fixation |
Human B-cell lymphomas |
DNA and RNA extraction, PCR, RT-PCR |
The ethanol fixed samples retained a high quality of both DNA and RNA and provided reproducible PCR products similar to frozen samples and significantly better than those extracted from formalin fixed samples |
Vincek V. et al. Lab Invest. (2003); 83(10):1427–35 |
NBF, UMFIX |
Mouse tissue, human tissues |
H&E, DNA and RNA extraction, PCR, RT-PCR, Real-Time PCR, Protein extraction, Western Blot, histochemistry, IHC |
The morphology of UMFIX-exposed tissue was comparable to that fixed in formalin. There were no significant differences between UMFIX-exposed and frozen tissues on PCR, RT-PCR, real-time PCR, and expression microarrays. |
Gillespie et al. Am J Pathol. (2002);160(2):449–457 |
70% ethanol, 95% ethanol, 70% ethanol: 100% methanol (3:1), 95% ethanol: 100% methanol (3:1), SafeFix, Streck, 10% NBF, Omnifix |
Human prostate and kidney specimens |
H&E, IHC, One-Dimensional PAGE, immunoblot, Two-Dimensional PAGE, Layered Expression Scanning, DNA and RNA extraction, Agarose Gel Electrophoresis, RT-PCR |
70% ethanol fixation is a useful method for molecular profiling studies. |
Vince D.G. et al. Anal Cell Pathol. (1997);15(2):119–129. |
10% NBF, Histochoice |
Human tissue specimens |
IHC |
Histochoice produces staining intensity that is comparable, and in many cases superior, to formalin |
Boon M.E. et al. Pathol Res Pract. (1992); 188(7):832–5 |
NBF, Kryofix |
Human tissues samples |
IHC |
All markers studied showed enhanced staining in the Kryofix blocks after 4 hours of fixation, whilst in some cases the immunostaining of the formalin blocks was even negative. |