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. 2019 Dec 5;20(24):6130. doi: 10.3390/ijms20246130

Table 2.

RNA editing sites predicted using RNAseq data in Utricularia amethystina cpDNA. The editing level is given in percentage and is showed for each biological replicate. * denotes amino acids with a change in physicochemical composition.

Morphotype Gene Genome (cpDNA) Codon Codon Position Amino Acid Editing Level
(Each Biorep)
Purple Position Strand from to from to P1 P2 P3
rps14 * 36,640 - UCA UUA 2 S L 96 100 100
petB 74,797 + CCA CUA 2 P L 100 100 97
White W1 W2 W3
ndhB 138,239 + CCA CUA 2 H Y 92 82 0
ndhD 113,305 - CUA UUA 1 Synonym 100 0 100
rbcL 55,651 + GCC GCU 3 Synonym 100 100 0
55,777 + AUC AUU 3 Synonym 100 100 0
rps14 * 36,572 - UCA UUA 2 S L 38 14 75
36,497 - CCA CUA 2 P L 100 0 72
36,553 - AAC AAU 3 Synonym 100 100 0
psbB 72,140 + GGC GGU 3 Synonym 100 100 0
71,372 + UAC UAU 3 Synonym 100 0 100
psaA 39,370 - AUC AUU 3 Synonym 100 100 100
petB 74,816 + CCA CUA 2 P L 100 0 97
Yellow Y1 Y2 -
rps14 36,439 - CCA CUA 2 P L 69 71 -
ccsA 111,950 + CUA UUA 1 Synonym 18 16 -
petB 74,948 + CCA CUA 2 P L 100 100 -