Skip to main content
. 2019 Dec 7;20(24):6181. doi: 10.3390/ijms20246181

Table 2.

Scaled binding scores of docked transglycosylation acceptors (kcal/mol). The orientation of site 1 and site 2 is described in the text.

Acceptor Position of Respective Acceptor Hydroxyl close to Catalytic Glu371
None (Site 1) None (Site 2) C-1 C-2 C-3 C-4 C-6
TfHex WT in complex with GlcNAcox/GalNAcox
GlcNAc (1) n.b.1/−3.99 −2.28/n.b. n.b./n.b. n.b./n.b. −2.37/n.b. 4.97/−3.36 −2.29/−2.09
Glc (2) −5.24/−2.68 n.b./n.b. -2.35/n.b. -2.14/n.b. −4.44/n.b. −4.70/n.b. −2.27/n.b.
MurNAc (3) n.b./ −4.46 −4.75/−2.93 n.b./n.b. n.b./n.b. n.b./n.b. n.b./n.b. −3.66/n.b.
GlcA (4) −5.25/−5.47 −2.31/−2.60 n.b./n.b. -2.03/n.b. n.b./n.b. −2.221/n.b. n.b./n.b.
GalNAc (5) −4.98/−2.62 −2.65/n.b. n.b./n.b. n.b./n.b. −4.03/−2.28 n.b./n.b. n.b./−2.23
Gal (6) −2.57/−3.47 −2.36/n.b. -2.29/n.b. n.b./n.b. −2.81/n.b. n.b./n.b. n.b./n.b.
MurNAc-OPr (XX) −2.42/−4.34 −4.41/−2.66 n.b./n.b. n.b./n.b. n.b./n.b. n.b./n.b. −4.12/−2.93
TfHex Y470H in complex with GlcNAcox/GalNAcox
GlcA (4) −5.45/3.80 n.b./−5.36 n.b./n.b. n.b./n.b. n.b./n.b. n.b./n.b. n.b./n.b.
MurNAc (3) n.b./n.b. −4.68/−4.61 n.b./n.b. n.b./n.b. n.b./n.b. n.b./n.b. n.b./−2.69
MurNAc-OPr (XX) −2.96/−3.19 −5.05/−4.50 n.b./n.b. n.b./n.b. n.b./n.b. n.b./n.b. n.b./−3.69

1 n.b. stands for not bound. Two most favorable binding scores for each complex are indicated in red; the scores corresponding to bonds confirmed by the synthetic experiment are underlined.