Table 2.
Acceptor | Position of Respective Acceptor Hydroxyl close to Catalytic Glu371 | ||||||
---|---|---|---|---|---|---|---|
None (Site 1) | None (Site 2) | C-1 | C-2 | C-3 | C-4 | C-6 | |
TfHex WT in complex with GlcNAcox/GalNAcox | |||||||
GlcNAc (1) | n.b.1/−3.99 | −2.28/n.b. | n.b./n.b. | n.b./n.b. | −2.37/n.b. | −4.97/−3.36 | −2.29/−2.09 |
Glc (2) | −5.24/−2.68 | n.b./n.b. | -2.35/n.b. | -2.14/n.b. | −4.44/n.b. | −4.70/n.b. | −2.27/n.b. |
MurNAc (3) | n.b./ −4.46 | −4.75/−2.93 | n.b./n.b. | n.b./n.b. | n.b./n.b. | n.b./n.b. | −3.66/n.b. |
GlcA (4) | −5.25/−5.47 | −2.31/−2.60 | n.b./n.b. | -2.03/n.b. | n.b./n.b. | −2.221/n.b. | n.b./n.b. |
GalNAc (5) | −4.98/−2.62 | −2.65/n.b. | n.b./n.b. | n.b./n.b. | −4.03/−2.28 | n.b./n.b. | n.b./−2.23 |
Gal (6) | −2.57/−3.47 | −2.36/n.b. | -2.29/n.b. | n.b./n.b. | −2.81/n.b. | n.b./n.b. | n.b./n.b. |
MurNAc-OPr (XX) | −2.42/−4.34 | −4.41/−2.66 | n.b./n.b. | n.b./n.b. | n.b./n.b. | n.b./n.b. | −4.12/−2.93 |
TfHex Y470H in complex with GlcNAcox/GalNAcox | |||||||
GlcA (4) | −5.45/3.80 | n.b./−5.36 | n.b./n.b. | n.b./n.b. | n.b./n.b. | n.b./n.b. | n.b./n.b. |
MurNAc (3) | n.b./n.b. | −4.68/−4.61 | n.b./n.b. | n.b./n.b. | n.b./n.b. | n.b./n.b. | n.b./−2.69 |
MurNAc-OPr (XX) | −2.96/−3.19 | −5.05/−4.50 | n.b./n.b. | n.b./n.b. | n.b./n.b. | n.b./n.b. | n.b./−3.69 |
1 n.b. stands for not bound. Two most favorable binding scores for each complex are indicated in red; the scores corresponding to bonds confirmed by the synthetic experiment are underlined.