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. 2019 Dec 12;20(24):6279. doi: 10.3390/ijms20246279

Table 2.

Data collection and structural parameters by SAXS.

Data Collection Parameters
Beamline B21, Diamond Light Source, Harwell (UK)
Detector Pilatus 2M
Beam size 0.2 × 0.2 mm
Energy 12.4 keV
Sample-to-detector distance (mm) 4014
q range (A−1) 0.0038–0.42
Exposure time (s) 3
Number of frames 620
Temperature (K) 293
Mode SEC online
Structural Parameters
Protein construct CNNM4cNMP CNNM4BAT-cNMP-Ctail CNNM4BAT-cNMP-Ctail + MgATP CNNM4BAT-cNMP-Ctail + PRL-1 CNNM4BAT-cNMP-Ctail + MgATP + PRL-1
SASBDB access code SASDER8 SASDEQ8 SASDES8 SASDEP8 SASDEN8
Concentration range (mg/mL) 7.0 5.0 4.7 8.5 5.0
q Interval for Fourier inversion (Å−1) 0.014–0.2018 0.007–0.164 0.010–0.109 0.09–0.173 0.009–0.125
Rg [from P(r)] (Å) 25.67 ± 1.32 41.62 ± 2.12 39.15 ± 1.38 47.90 ± 5.24 47.20 ± 2.55
Rg [from Guiner approximation] (Å) 25.52 ± 1.65 40.22 ± 0.54 39.23 ± 1.98 46.55 ± 0.81 44.48 ± 1.42
sRg limits [from Guiner approx.] 0.34–1.30 0.31–1.30 0.41–1.30 0.36–1.29 0.38–1.29
Dmax (Å) 96 166 143 185 183
Porod volume estimate (nm3) 102 156 149 226 216
Porod exponent 2.3 3.2 3.3 3.1 3.1
Molecular Mass (kDa)
from Porod volume (×0.58) 59 90 86 131 125
from amino acid sequence 21 48 48 68 68
Software Employed
Primary data reduction DAWN pipeline (Diamond Light Source, UK)
Data processing ScÅtter v3.1v
Ab initio modelling GASBOR
Validation and averaging DAMAVER/DAMCLUST
Computation of model intensities CRYSOL/CORAL

q = 4πsin(θ)/λ, where 2θ is the scattering angle and λ the wavelength.