Table 2.
Data Collection Parameters | |||||
Beamline | B21, Diamond Light Source, Harwell (UK) | ||||
Detector | Pilatus 2M | ||||
Beam size | 0.2 × 0.2 mm | ||||
Energy | 12.4 keV | ||||
Sample-to-detector distance (mm) | 4014 | ||||
q range (A−1) | 0.0038–0.42 | ||||
Exposure time (s) | 3 | ||||
Number of frames | 620 | ||||
Temperature (K) | 293 | ||||
Mode | SEC online | ||||
Structural Parameters | |||||
Protein construct | CNNM4cNMP | CNNM4BAT-cNMP-Ctail | CNNM4BAT-cNMP-Ctail + MgATP | CNNM4BAT-cNMP-Ctail + PRL-1 | CNNM4BAT-cNMP-Ctail + MgATP + PRL-1 |
SASBDB access code | SASDER8 | SASDEQ8 | SASDES8 | SASDEP8 | SASDEN8 |
Concentration range (mg/mL) | 7.0 | 5.0 | 4.7 | 8.5 | 5.0 |
q Interval for Fourier inversion (Å−1) | 0.014–0.2018 | 0.007–0.164 | 0.010–0.109 | 0.09–0.173 | 0.009–0.125 |
Rg [from P(r)] (Å) | 25.67 ± 1.32 | 41.62 ± 2.12 | 39.15 ± 1.38 | 47.90 ± 5.24 | 47.20 ± 2.55 |
Rg [from Guiner approximation] (Å) | 25.52 ± 1.65 | 40.22 ± 0.54 | 39.23 ± 1.98 | 46.55 ± 0.81 | 44.48 ± 1.42 |
sRg limits [from Guiner approx.] | 0.34–1.30 | 0.31–1.30 | 0.41–1.30 | 0.36–1.29 | 0.38–1.29 |
Dmax (Å) | 96 | 166 | 143 | 185 | 183 |
Porod volume estimate (nm3) | 102 | 156 | 149 | 226 | 216 |
Porod exponent | 2.3 | 3.2 | 3.3 | 3.1 | 3.1 |
Molecular Mass (kDa) | |||||
from Porod volume (×0.58) | 59 | 90 | 86 | 131 | 125 |
from amino acid sequence | 21 | 48 | 48 | 68 | 68 |
Software Employed | |||||
Primary data reduction | DAWN pipeline (Diamond Light Source, UK) | ||||
Data processing | ScÅtter v3.1v | ||||
Ab initio modelling | GASBOR | ||||
Validation and averaging | DAMAVER/DAMCLUST | ||||
Computation of model intensities | CRYSOL/CORAL |
q = 4πsin(θ)/λ, where 2θ is the scattering angle and λ the wavelength.