Table 1.

Statistics of reads generated by transcriptome sequencing of longan SE

Sample Name	Total Clean reads	Total Reads Map to Genome	Genome Mapping Rate (%)	Total Reads Map to Gene	Gene Mapping Rate (%)	Expressed Transcripts	Expressed Exon	Novel Transcripts	Extend Gene	Alternative Splicing
NEC	59,785,854	48,798,229	81.62	34,380,246	57.51	22,743	110,864	1935	10,281	35,084
EC	64,876,258	52,623,741	81.11	35,386,494	54.54	19,745	103,200	1710	9092	19,056
ICpEC	59,580,846	48,346,067	81.14	30,535,088	51.25	21,144	107,592	1816	9197	36,446
GE	59,540,168	48,871,200	82.08	29,214,788	49.07	21,102	107,971	1732	9638	39,768