Table 3.
The top 20 most expressed genes in NEC, EC, ICpEC, GE library
| NO. | Gene_id | FPKM_NEC | Description |
|---|---|---|---|
| 1 | Dlo_008315.1 | 58,812.43 | repetitive proline-rich cell wall protein 2 |
| 2 | Dlo_019949.1 | 36,215.45 | Late embryogenesis abundant protein Lea5 |
| 3 | Dlo_008311.1 | 11,187.75 | unknow protein |
| 4 | Dlo_028175.1 | 10,885 | unknow protein |
| 5 | Dlo_011615.1 | 10,317.69 | extensin-2-like |
| 6 | Dlo_030517.1 | 8931.79 | chitinase CHI |
| 7 | Dlo_004649.1 | 7800.33 | metallothionein |
| 8 | Dlo_024177.1 | 6055.72 | chitinase |
| 9 | Dlo_017033.1 | 5645.16 | pathogenesis-related protein 1 |
| 10 | Dlo_008997.3 | 5476.22 | unknow protein |
| 11 | Dlo_009172.1 | 5469.19 | osmotin-like protein I |
| 12 | Dlo_021620.1 | 4483.38 | peroxidase 4 |
| 13 | Dlo_003142.1 | 4116.17 | unknow protein |
| 14 | Dlo_030075.1 | 3732.29 | Wound-induced protein WIN1 precursor |
| 15 | Dlo_030519.1 | 3587.55 | chitinase CHI |
| 16 | Dlo_022694.1 | 3546.1 | 14 KDa proline-rich protein DC2.15-like |
| 17 | Dlo_030516.1 | 3288.7 | chitinase |
| 18 | Dlo_030074.1 | 3170.89 | PR-4 protein |
| 19 | Dlo_011076.1 | 2572.89 | ubiquitin C |
| 20 | Dlo_011004.1 | 2367.71 | non-specific lipid-transfer protein 2-like |
| NO. | Gene_id | FPKM_EC | Description |
| 1 | Dlo_030812.1 | 15,114.88 | Protodermal factor 1.3 PDF1.3 |
| 2 | Dlo_013012.1 | 7392.37 | lipid transfer protein |
| 3 | Dlo_030517.1 | 5117.6 | chitinase CHI |
| 4 | Dlo_025725.1 | 4537.79 | Pollen-specific protein C13 precursor |
| 5 | Dlo_020986.1 | 4136.45 | Indole-3-acetic acid-amido synthetase GH3.6 |
| 6 | Dlo_011615.1 | 4031.23 | extensin-2-like |
| 7 | Dlo_021620.1 | 3793.82 | peroxidase 4 |
| 8 | Dlo_032035.1 | 2962.58 | histone H4-like |
| 9 | Dlo_031913.1 | 2959.02 | lipid binding protein |
| 10 | Dlo_003789.1 | 2766.68 | EXORDIUM-like 2 EXL2 |
| 11 | Dlo_005176.1 | 2363.28 | omega-6 fatty acid desaturase |
| 12 | Dlo_026048.1 | 2219.4 | root meristem growth factor 3 RGF3 |
| 13 | Dlo_033433.1 | 2202.74 | unknow |
| 14 | Dlo_019526.1 | 2145.11 | unknow |
| 15 | Dlo_017203.1 | 2144.67 | Hsp90 |
| 16 | Dlo_026351.1 | 2131.12 | peptidase |
| 17 | Dlo_017092.1 | 2118.54 | transcription factor leafy cotyledon1 |
| 18 | Dlo_020190.1 | 2035.05 | cysteine protease |
| 19 | Dlo_007905.1 | 2000.4 | small ubiquitin-related modifier 2-like |
| 20 | Dlo_012332.1 | 1967.95 | 26S proteasome complex subunit DSS1 |
| NO. | Gene_id | FPKM_ICpEC | Description |
| 1 | Dlo_030812.1 | 10,330.16 | protodermal factor 1.3 |
| 2 | Dlo_026048.1 | 6620.49 | root meristem growth factor 3 RGF3 |
| 3 | Dlo_031913.1 | 4694.68 | lipid binding protein |
| 4 | Dlo_013012.1 | 4301.99 | lipid transfer protein |
| 5 | Dlo_008315.1 | 4140.34 | proline-rich cell wall protein 2-like PRP2 |
| 6 | Dlo_032146.1 | 3401.87 | NADH dehydrogenase (ubiquinone)1 beta subcomplex 7 |
| 7 | Dlo_028379.1 | 2815.75 | dehydrin 1 |
| 8 | Dlo_025725.1 | 2772.74 | Pollen-specific protein C13 precursor |
| 9 | Dlo_020986.1 | 2439.09 | Indole-3-acetic acid-amido synthetase GH3.6 |
| 10 | Dlo_021620.1 | 2343.85 | peroxidase 4 |
| 11 | Dlo_019476.1 | 2300.16 | unknow |
| 12 | Dlo_028328.1 | 2106.48 | high mobility group box 1 |
| 13 | Dlo_017203.1 | 1958.55 | Hsp90 |
| 14 | Dlo_019638.1 | 1958.53 | elongation factor 1-alpha |
| 15 | Dlo_030608.1 | 1823.94 | unknow |
| 16 | dlo_034323.1 | 1818.75 | histone H1 |
| 17 | Dlo_011615.1 | 1789.67 | extensin-2-like |
| 18 | Dlo_010406.1 | 1773.3 | transcription factor BTF3 |
| 19 | Dlo_017539.1 | 1684.81 | histone H2B.1-like |
| 20 | Dlo_030517.1 | 1598.6 | chitinase CHI |
| NO. | Gene_id | FPKM_GE | Description |
| 1 | Dlo_013012.1 | 4004.61 | lipid transfer protein |
| 2 | Dlo_026048.1 | 3762.46 | root meristem growth factor 3 RGF3 |
| 3 | Dlo_021620.1 | 3304.97 | peroxidase 4 |
| 4 | Dlo_031913.1 | 2957.57 | lipid binding protein |
| 5 | Dlo_032146.1 | 2784.3 | NADH dehydrogenase (ubiquinone)1 beta subcomplex 7 |
| 6 | Dlo_028379.1 | 2676 | dehydrin 1 |
| 7 | Dlo_014867.1 | 2300.44 | argonaute 4 |
| 8 | Dlo_008315.1 | 2218.56 | proline-rich cell wall protein 2-like PRP2 |
| 9 | Dlo_030608.1 | 2100.52 | unknow |
| 10 | Dlo_012964.1 | 2091.04 | extensin, proline-rich protein |
| 11 | Dlo_032870.1 | 2072.74 | glutathione S-transferase parC-like |
| 12 | Dlo_025725.1 | 2018.61 | Pollen-specific protein C13 precursor |
| 13 | Dlo_019476.1 | 1997.45 | unknow |
| 14 | Dlo_015927.1 | 1907.93 | unknow |
| 15 | Dlo_030812.1 | 1899.07 | protodermal factor 1.3 |
| 16 | Dlo_028328.1 | 1848.42 | high mobility group box 1 |
| 17 | Dlo_018634.1 | 1743.25 | 60S ribosomal protein L27Ae |
| 18 | Dlo_019638.1 | 1709.96 | elongation factor 1-alpha |
| 19 | Dlo_017203.1 | 1696.73 | Hsp90 |
| 20 | Dlo_020821.1 | 1665.7 | leafy cotyledon1-like |