Table 4.
Highly interconnected CpGs in co-methylation modules exclusively associated with one of the MSA pathological subtypes
| Module | CpGs | Genes | Chr | Feature | Association |
|---|---|---|---|---|---|
| Violet | cg00566635 | ADAMTS8 | 11 | 5′UTR | MSA mixed |
| cg07058484 | 16 | IGR | |||
| cg20697767 | RPRML | 17 | 1stExon | ||
| cg09728904 | ASS1 | 9 | Body | ||
| cg07049764 | 6 | IGR | |||
| cg01040624 | SLC12A8 | 3 | Body | ||
| cg21242212 | MIR208B | 14 | TSS1500 | ||
| cg08388822 | ZSWIM7 | 17 | Body | ||
| cg08318600 | C16orf38 | 16 | Body | ||
| cg05788548 | SKI | 1 | Body | ||
| Lightcyan | cg10341355 | SLC13A3 | 20 | Body | MSA OPCA |
| cg00837537 | 8 | IGR | |||
| cg12408507 | DYSF | 2 | Body | ||
| cg01481205 | MIR4534 | 22 | TSS1500 | ||
| cg00213091 | INPP5A | 10 | 3′UTR | ||
| cg19851810 | EPHB2 | 1 | Body | ||
| cg04315300 | 1 | IGR | |||
| cg09033376 | ASPRV1 | 2 | 1stExon | ||
| cg12945363 | RGS3 | 9 | Body | ||
| cg11931953 | FOXK1 | 7 | Body | ||
| Purple | cg04976746 | SLC30A1 | 1 | Body | MSA OPCA |
| cg14244136 | TPM1 | 15 | 1stExon | ||
| cg10088041 | LOC145663 | 15 | TSS200 | ||
| cg01688355 | FAR1 | 11 | 5′UTR | ||
| cg10654015 | TP73 | 1 | TSS200 | ||
| cg04346539 | ORMDL2 | 12 | TSS1500 | ||
| cg03174294 | GPR124 | 8 | 5′UTR | ||
| cg14042203 | DTX4 | 11 | TSS200 | ||
| cg26100711 | MIXL1 | 1 | TSS200 | ||
| cg11142248 | FLJ43390 | 14 | Body | ||
| Orangered4 | cg12059180 | CLDN18 | 3 | TSS1500 | MSA OPCA |
| cg20506380 | SPTA1 | 1 | Body | ||
| cg06797478 | 13 | IGR | |||
| cg11977158 | SYN3 | 22 | Body | ||
| cg11275803 | RPS18 | 6 | TSS1500 | ||
| cg12456435 | CSDE1 | 1 | 5′UTR | ||
| cg27052442 | ERBB2 | 17 | 5′UTR | ||
| cg12436715 | TTLL3 | 3 | 3′UTR | ||
| cg22966196 | ABCC2 | 10 | Body | ||
| cg16039979 | C1orf86 | 1 | 5′UTR | ||
| Darkmagenta | cg22674699 | HOXD9 | 2 | 1stExon | MSA SND |
| cg02792822 | PSAP | 10 | Body | ||
| cg14141984 | SETD1A | 16 | Body | ||
| cg15768526 | KNOP1 | 16 | 5′UTR | ||
| cg27151617 | ANKRD7 | 7 | TSS1500 | ||
| cg25015867 | ZNF521 | 18 | Body | ||
| cg05386151 | NUCKS1 | 1 | 5′UTR | ||
| cg05906350 | FAM190B | 10 | 5′UTR | ||
| cg07959065 | AMFR | 16 | Body | ||
| cg03816598 | 2 | IGR |