Table 1.
Overview of curated interaction data from 35 resources
| Evidence type | Interaction type | Interaction entry | Database resource | Reference |
|---|---|---|---|---|
| Experimental validation | RCI | 4525 | SM2miR | (27) |
| 4113 | ncDR | (28) | ||
| 822 | EmDL | (29) | ||
| RDI | 138 062 | LnChrom | (30) | |
| RPI | 1 530 693 | POSTAR2 | (31) | |
| 199 835 | TransmiR v2.0 | (32) | ||
| RRI | 258 818 | RISE | (33) | |
| 155 622 | LncRNA2Target v2.0 | (34) | ||
| 7904 | VIRmiRNA | (35) | ||
| 3028 | LncACTdb 2.0 | (36) | ||
| 2680 | NPInter v3.0 | (37) | ||
| 1846 | OncomiRDB | (38) | ||
| 1213 | ncRDeathDB | (39) | ||
| 559 | miR2Disease | (40) | ||
| 405 | sRNATarBase 3.0 | (41) | ||
| 81 | MNDR v2.0 | (42) | ||
| 60 | LncRNADisease 2.0 | (43) | ||
| RHI/RPI | 9 515 123 | ChIPBase v2.0 | (44) | |
| RPI/RRI | 1 246 631 | starBase v2.0 | (45) | |
| 737 835 | miRTarBase | (46) | ||
| Computational prediction | RPI | 23 304 537 | RNAct | (47) |
| RRI | 1 956 709 | miRDB | (48) | |
| 1 557 635 | miRanda | (49) | ||
| 547 003 | piRTarBase | (50) | ||
| 247 731 | RepTar | (51) | ||
| 191 123 | TargetScan | (52) | ||
| 149 817 | EIMMo | (53) | ||
| 106 471 | DroID | (54) | ||
| 74 884 | ZIKV - CDB | (55) | ||
| 243 | HumanViCe | (56) | ||
| 14 | miRcode | (57) | ||
| Experimental validation/ | RRI | 538 529 | VmiReg | (58) |
| Computational prediction | RPI/RRI | 5 272 396 | RAID v2.0 | (22) |
| 327 123 | RAIN | (59) | ||
| 110 293 | ViRBase | (60) |