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. 2019 Oct 11;48(D1):D1051–D1056. doi: 10.1093/nar/gkz872

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© The Author(s) 2019. Published by Oxford University Press on behalf of Nucleic Acids Research.

This is an Open Access article distributed under the terms of the Creative Commons Attribution Non-Commercial License (http://creativecommons.org/licenses/by-nc/4.0/), which permits non-commercial re-use, distribution, and reproduction in any medium, provided the original work is properly cited. For commercial re-use, please contact journals.permissions@oup.com

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Figure 2. — Data visualizations in VDJbase. (A) Comparison between 8 genotypes. Row and column represent individual and gene, respectively. Colors correspond to alleles. (B) Comparison between two haplotypes. Haplotype is inferred using the IGHD2-21 gene as an anchor gene. The upper panel corresponds to the chromosome carrying IGHD2-21*01 and the lower panel to the chromosome carrying IGHD2-21*02. (C) Heterozygosity abundance for each gene in the samples of interest. (D) Gene usage. Each point represents an individual. Colors correspond to V family gene. (E) Allele appearance of IGHJ6. Left Y axis corresponds to the number of individuals, and the right Y axis corresponds to the frequency of the allele in the samples of interest. (F) Allele appearance of IGHJ4 and IGHJ5. Y axis is the same as in (E). Gene order in all graphs correspond to their location on the chromosome.