Table 1.
DGRP-379 | DGRP-732 | Iso-1a | |||
---|---|---|---|---|---|
Contigs | Scaffolds | Contigs | Scaffolds | Scaffolds | |
Size b | 134 693 935 | 133 660 114 | 139 557 193 | 141 550 979 | 139 819 141 |
N50 | 6 596 424 | 24 495 473 | 5 444 332 | 25 701 336 | 25 287 040 |
NG50 c | 3 858 703 | 24 035 717 | 3 214 717 | 25 701 336 | 23 542 372 |
N | 113 | 100 | 179 | 250 | 1857 |
aRelease 6 with known Y-linked scaffolds removed.
bDifference in assembly size between contigs and scaffolds is due to insertion of gaps during scaffolding and insertion/deletion of sequence during polishing.
cTrue genome size of 175 Mb was used for all calculations.