Table 1:
Assembly of swimming crab genome
Term | Contig phase | Hi-C phase | ||
---|---|---|---|---|
Size (bp) | Number | Size (bp) | Number | |
N90 | 439,683 | 334 | 11,273,125 | 41 |
N80 | 1,225,551 | 203 | 14,151,211 | 33 |
N70 | 2,035,154 | 141 | 16,942,622 | 27 |
N60 | 2,950,146 | 100 | 19,786,189 | 21 |
N50 | 4,121,416 | 71 | 21,793,880 | 17 |
Maximum length | 17,984,318 | - | 42,710,960 | - |
Total length | 1,004,084,521 | - | 1 005,046,021 | - |
No. ≥100 bp | - | 2,446 | - | 523 |
No. ≥10 kb | - | 1,756 | - | 314 |
Note: Contig phase represents results assembled by WTDBG software, and Hi-C phase represents scaffold statistics of genome after chromosome assembly.