(A) Quantification of six VD/DD (unc-25::gfp, unc-47::rfp, ttr-39::mCherry, klp-4::gfp, alr-1::gfp and irx-1::egfp) and one DD (flp-13::gfp) markers in WT and unc-3 (n3435) animals at L4. No statistically significant effects were observed in unc-3 mutants. N > 13. N. S: not significant. (B) A table showing that VD and VC identity genes are ectopically expressed in distinct cholinergic MNs upon unc-3 depletion. Top two rows: A summary map of VD and VC gene expression with single-cell resolution in unc-3 mutants, which is based on the co-localization analysis shown below. Each column represents an individual MN in the VNC of an unc-3-depleted hermaphrodite worm. Ten randomly selected worms that co-express VD/DD marker ttr-39::mCherry and VD marker ser-2::gfp or VC marker ida-1::gfp are analyzed. The expression of ttr-39::mCherry is not affected by unc-3 depletion, which serves as a positional landmark for reference. This landmark together with the invariant MN cell body position along the VNC enable the identification of distinct unc-3-depleted MNs that lose cholinergic features and concomitantly gain either ‘VD-like’ or ‘VC-like’ features. Below this table, examples of the co-localization analysis are provided. Representative magnified images are shown. The identity of unc-3-depleted MNs that acquire VC or VD terminal features is shown. Note that VC-like terminal features are mainly acquired by MNs of the AS cholinergic subtype, whereas VD-like terminal features are acquired by select members of four cholinergic MN subtypes (DA, DB, VA, VB). (C) The DA and DB cholinergic MNs are born embryonically and therefore present in the VNC at L1. Corroborating our results from panel B, only the VD terminal identity marker (ser-2) shows ectopic expression in DA and DB neurons of unc-3 mutants at L1. This is not the case for the VC terminal identity markers (glr-5, ida-1). Representative images are shown on the left. Arrowheads point to MN cell bodies with ectopic gfp marker expression. Green fluorescence signal is shown in white for better contrast. Quantification is on the right. N > 22. ***p<0.001. (D) Terminal identity markers of VD/VC MNs (flp-11, twk-46 and ilys-4) are ectopically expressed in unc-3-depleted cholinergic MNs. Representative images of larval stage 4 (L4) hermaphrodites are shown. Similar results were obtained in adult animals. Arrowheads point to MN cell bodies with marker expression. Fluorescence signal is shown in white for better contrast. Dotted black box indicates imaged area. (E) Quantification of data shown in panel D.. N > 18. ***p<0.001.