Table 2. The summary statistics of each breed.
| Breeds | Q30(%) | GC Content (%) | Number of reads | Average of reads | Number of SNPs | Average of SNPs |
|---|---|---|---|---|---|---|
| Cobb | 88.03-93.61 | 39.45-39.95 | 8,583,088-13,272,170 | 10,272,557 | 497,630-674,671 | 565,326 |
| Leghorn | 88.27-93.66 | 39.53-39.86 | 9,346,428-15,173,350 | 11,266,784 | 490,983-687,203 | 560,692 |
| CH | 81.48-93.72 | 39.61-40.09 | 7,138,496-11,804,060 | 9,058,946 | 276,849-701,604 | 517,315 |
| SH | 89.46-93.55 | 39.74-51.75 | 6,148,366-13,994,982 | 10,159,972 | 266,804-773,920 | 581,273 |
| NDY | 88.01-94.05 | 39.64-41.78 | 6,017,376-14,258,234 | 10,126,755 | 235,509-829,341 | 591,750 |
| LSX | 89.18-95.31 | 39.67-55.01 | 7,314,714-10,270,592 | 8,900,590 | 184,633-666,602 | 634,112 |
| XY | 88.53-94.58 | 39.62-43.90 | 7,084,494-18,843,698 | 11,580,978 | 465,230-868,429 | 651,443 |
| LSF | 87.94-93.98 | 39.58-40.64 | 6,656,578-15,963,202 | 10,054,728 | 443,974-827,724 | 528,045 |
| LYW | 88.71-94.05 | 39.64-41.78 | 6,485,878-15,820,446 | 10,553,808 | 437,580-855,380 | 624,448 |
| DLW | 88.12-94.12 | 39.50-40.83 | 6,786,192-12,541,944 | 9,609,455 | 436,400-740,093 | 625,699 |