Table 2.

Summary of RNA-seq data

Sample names	T24_1	T24_2	T24_3	T24R_1	T24R_2	T24R_3
Raw reads	58933548	59871070	61514088	63778852	64235706	64668936
Total raw bases	8840032200	8980660500	9227113200	9566827800	9635355900	9700940400
Clean reads	56587510	57490828	59066942	61842520	61678722	62707156
Total clean bases	8310853554	8443586068	8675127770	914634152	9058309704	9274120003
Mapped reads	47318925	48083736	50725437	54740709	51597349	55502209
Mapped ratio	83.62%	83.64%	82.46%	88.52%	83.66%	88.51%
Uniquely mapped reads	36411305	36993627	38460380	46228373	39711626	46846663
Uniquely mapped ratio	64.35%	64.35%	62.52%	74.75%	64.38%	74.71%
Mismatch ratio	21.08%	20.75%	20.75%	13.32%	20.7%	13.32%
rRNA ratio	0.34%	0.34%	0.34%	0.38%	0.34%	0.38%