Table 1.
Top 10 genes with the highest and lowest values of the fold expression change within the three experimental comparison groups: C1 vs. C0, C2 vs. C0, C3 vs. C0.
| Comparison group | Gene symbol | Gene name | Entrez Gene ID | Fold change |
|---|---|---|---|---|
| C1 vs.C0 | EDN1 | endothelin 1 | 1906 | 10.09 |
| ANKRD1 | ankyrin repeat domain 1 (cardiac muscle) | 27063 | 5.95 | |
| SCUBE3 | signal peptide. CUB domain. EGF-like 3 | 222663 | 5.38 | |
| HAPLN3 | hyaluronan and proteoglycan link protein 3 | 145864 | 4.47 | |
| SLC7A5 | solute carrier family 7 (amino acid transporter light chain. L system). member 5 | 8140 | 4.23 | |
| MARCH4 | membrane-associated ring finger (C3HC4) 4. E3 ubiquitin protein ligase. | 57574 | 3.91 | |
| PSAT1 | phosphoserine aminotransferase 1 | 29968 | 3.86 | |
| KRTAP2-3 | keratin associated protein 2-3 | 730755 | 3.76 | |
| HSPB7 | heat shock 27kDa protein family. member 7 (cardiovascular) | 27129 | 3.74 | |
| OXTR | oxytocin receptor | 5021 | 3.52 | |
| ABCA6 | ATP-binding cassette. sub-family A (ABC1). member 6 | 23460 | -3.74 | |
| RSPO3 | R-spondin 3 | 84870 | -4.14 | |
| COLEC12 | collectin sub-family member 12 | 81035 | -4.14 | |
| FOSB | FBJ murine osteosarcoma viral oncogene homolog B | 2354 | -4.16 | |
| ABCA9 | ATP-binding cassette. sub-family A (ABC1). member 9 | 10350 | -4.29 | |
| APOD | apolipoprotein D | 347 | -4.30 | |
| RCAN2 | regulator of calcineurin 2 | 1023 1 | -5.30 | |
| PDGFD | platelet derived growth factor D | 80310 | -5.37 | |
| MMP1 | matrix metallopeptidase 1 (interstitial collagenase) | 43 12 | -7.29 | |
| DPP4 | dipeptidyl-peptidase 4 | 1803 | -10.99 | |
| C2 vs.C0 | ANKRD1 | ankyrin repeat domain 1 (cardiac muscle) | 27063 | 15.34 |
| ASPN | asporin | 54829 | 14.50 | |
| ITGA8 | integrin. alpha 8 | 8516 | 14.40 | |
| SRGN | serglycin | 5552 | 9.67 | |
| MSTN | myostatin | 2660 | 9.15 | |
| HAPLN3 | hyaluronan and proteoglycan link protein 3 | 145864 | 8.98 | |
| COL11A1 | collagen. type XI. alpha 1 | 1301 | 8.34 | |
| FLG | filaggrin | 2312 | 8.23 | |
| SCUBE3 | signal peptide. CUB domain. EGF-like 3 | 222663 | 7.56 | |
| LGR5 | leucine-rich repeat containing G protein-coupled receptor 5 | 8549 | 7.30 | |
| APOD | apolipoprotein D | 347 | -4.30 | |
| DUX4 | double homeobox 4 | 100288687 | -4.39 | |
| DPP4 | dipeptidyl-peptidase 4 | 1803 | -4.45 | |
| MMP3 | matrix metallopeptidase 3 (stromelysin 1. progelatinase) | 4314 | -5.07 | |
| USP17L5 | ubiquitin specific peptidase 17-like family member 5 | 728386 | -5.56 | |
| ABCA6 | ATP-binding cassette. sub-family A (ABC1). member 6 | 23460 | -5.60 | |
| RSPO3 | R-spondin 3 | 84870 | -6.83 | |
| CTSK | cathepsin K | 1513 | -7.29 | |
| MMP1 | matrix metallopeptidase 1 (interstitial collagenase) | 43 12 | -7.96 | |
| FOSB | FBJ murine osteosarcoma viral oncogene homolog B | 2354 | -8.42 | |
| C3 vs. C0 | KRTAP2-3 | keratin associated protein 2-3 | 730755 | 12.81 |
| SCUBE3 | signal peptide. CUB domain. EGF-like 3 | 222663 | 10.53 | |
| ANKRD1 | ankyrin repeat domain 1 (cardiac muscle) | 27063 | 9.15 | |
| OXTR | oxytocin receptor | 5021 | 6.97 | |
| EDN1 | endothelin 1 | 1906 | 5.99 | |
| SRGN | serglycin | 5552 | 5.93 | |
| KRTAP1-5 | keratin associated protein 1-5 | 83895 | 5.92 | |
| ANLN | anillin. actin binding protein | 54443 | 5.85 | |
| FBN2 | fibrillin 2 | 2201 | 5.27 | |
| PRR11 | proline rich 11 | 55771 | 5.18 | |
| RCAN2 | regulator of calcineurin 2 | 10231 | -6.64 | |
| APOD | apolipoprotein D | 347 | -7.50 | |
| FOSB | FBJ murine osteosarcoma viral oncogene homolog B | 2354 | -7.52 | |
| CTSK | cathepsin K | 1513 | -7.73 | |
| FOS | FBJ murine osteosarcoma viral oncogene homolog | 2353 | -7.77 | |
| MMP1 | matrix metallopeptidase 1 (interstitial collagenase) | 4312 | -8.62 | |
| PDGFD | platelet derived growth factor D | 80310 | -10.27 | |
| ABCA6 | ATP-binding cassette. sub-family A (ABC1). member 6 | 23460 | -14.56 | |
| DPP4 | dipeptidyl-peptidase 4 | 1803 | -15.95 | |
| ABCA9 | ATP-binding cassette. sub-family A (ABC1). member 9 | 10350 | -17.06 |