Figure 2.

Association of m⁶A with APA usage in B73. A, The number of genes defined in each category in the corresponding analysis. B, Proportion of m⁶A-modifed transcripts within transcripts with (left) or without APA usage (right). P values were calculated using the Fisher’s exact test. C, Proportion of transcripts containing APA usage within m⁶A-methylated (left), and nonmethylated transcripts (right). P values were calculated using the Fisher’s exact test. D, Integrative Genomics Viewer plots of two examples representing m⁶A located in the proximal (left) or distal (right) APA. The arrows indicate the gene direction from the 5′ to 3′ end.