Antibodies |
Mouse monoclonal anti-Por11 |
Abcam |
Cat# ab110326; RRID:AB_10865182 |
Mouse monoclonal anti-Cox2 |
Abcam |
Cat# ab110271; RRID:AB_10858117 |
Rabbit polyclonal anti-Coa6 |
Gohil Lab |
N/A |
Rabbit polyclonal anti- SCO1 |
Bourens et al., 2014 |
N/A |
Rabbit polyclonal anti- SCO2 |
Fitzgerald |
Cat# 70R-20118 |
Rabbit Polyclonal anti- COA6 |
Proteintech |
Cat# 24209–1-AP |
Mouse monoclonal anti- COX2 |
Mitoscience |
Cat# MS405; RRID:AB_1618186 |
Rabbit monoclonal anti- GAPDH |
Cell signaling |
Cat# 14C10–2118 |
hFAB Rhodamine anti-Actin |
Bio-Rad |
Cat# 12004163 |
Bacterial and Virus Strains |
E. coli strain DH5α |
NEB |
Cat# C2987I |
E. coli BL21(DE3) |
NEB |
Cat# C2527I |
Chemicals, Peptides, and Recombinant Proteins |
Ammonium-15N chloride |
Sigma-Aldrich |
Cat# 299251 |
BME Vitamins 100x solution |
Sigma-Aldrich |
Cat# B6891 |
D-(+)-Raffinose pentahydrate |
Sigma-Aldrich |
Cat# R0250 |
D-Glucose-13C6
|
Sigma-Aldrich |
Cat# 389374 |
DL-Dithiothreitol |
Sigma-Aldrich |
Cat# D0632 |
Ergosterol |
Sigma-Aldrich |
Cat# 45480 |
Isopropyl β-D-thiogalactoside |
Sigma-Aldrich |
Cat# I6758 |
Trans-4,5-Dihydroxy-1,2-dithiane (Oxidized DTT) |
Sigma-Aldrich |
Cat# D3511 |
Deposited Data |
Human COA6 structure |
This Paper |
PDB: 6NL3 |
Experimental Models: Cell Lines |
COA6 patient cell line |
Baertling et al., 2015 |
N/A |
SCO1–1 (R149X/P174L) patient cell line |
Valnot et al., 2000 |
N/A |
SCO1–2 (V93X/M294V) patient cell line |
Leary et al., 2013 |
N/A |
SCO2–9 patient cell line |
Leary et al., 2013 |
N/A |
Experimental Models: Organisms/Strains |
S. cerevisiae: Strain background: BY4741 WT - MATa, his3Δ1, leu2Δ0, met15Δ0, ura3Δ0
|
Miriam L. Greenberg |
N/A |
S. cerevisiae: Strain background: BY4741 coa6Δ - MATa, his3Δ1, leu2Δ0, met15Δ0, ura3Δ0 coa6Δ::kanMX4
|
Open Biosystems |
N/A |
S. cerevisiae: Strain background: BY4741 sco1Δ - MATa, his3Δ1, leu2Δ0, met15Δ0, ura3Δ0 sco1Δ::kanMX4
|
Open Biosystems |
N/A |
S. cerevisiae: Strain background: BY4741 sco2Δ - MATa, his3Δ1, leu2Δ0, met15Δ0, ura3Δ0 sco2Δ::kanMX4
|
Open Biosystems |
N/A |
S. cerevisiae: Strain background: BY4741 cox11Δ - MATa, his3Δ1, leu2Δ0, met15Δ0, ura3Δ0 cox11Δ::kanMX4
|
Open Biosystems |
N/A |
S. cerevisiae: Strain background: BY4741 cox17Δ - MATa, his3Δ1, leu2Δ0, met15Δ0, ura3Δ0 cox17Δ::kanMX4
|
Open Biosystems |
N/A |
S. cerevisiae: Strain background: STY10 sco2Δcoa6Δ - MATa, his3Δ1, leu2Δ0, ura3Δ0, lys2Δ0, sco2Δ::KanMX4, coa6Δ::NatMX4
|
Ghosh et al., 2016 |
N/A |
Recombinant DNA |
pGEX4t-1- COA6 isoform3 |
This paper |
N/A |
pET28a- Coa6 |
This paper |
N/A |
pETG-30A- SCO1 |
Banci et al., 2006 |
N/A |
pETG-30A- SCO2 |
Banci et al., 2007 |
N/A |
pET9a-COX2-chimeric protein |
Morgada et al., 2015 |
N/A |
pRS416 -hyCOA6 |
Ghosh et al., 2016 |
N/A |
pRS416 -hyCOA6w26C
|
Soma et al., 2018 |
N/A |
pRS416 -hyCOA6w33R
|
Soma et al., 2018 |
N/A |
pRS416 -hyCOA6E54X
|
Soma et al., 2018 |
N/A |
pRS416 -hyCOA6(Δ65–79) |
This paper |
N/A |
pRS416 -hyCOA6(Δ73–79) |
This paper |
N/A |
Software and Algorithms |
The PyMOL Molecular Graphics System, v2.0 |
Schrödinger LLC |
https://pymol.org/2/ |
HADDOCK2.2 |
van Zundert and Bonvin, 2014 |
http://haddock.science.uu.nl/services/HADDOCK2.2/ |
Topspin, version 3.2 |
Bruker, Germany |
N/A |
Sparky, version 3.112 |
UCSF |
https://www.cgl.ucsf.edu/home/sparky/distrib-3.112/download.html |
CYANA software package |
Güntert and Buchner, 2015 |
https://www.las.jp/english/products/cyana.html |
TALOS+ |
Shen et al., 2009 |
https://spin.niddk.nih.gov/bax/nmrserver/talos/ |
Xplor NIH version 2.50 |
Schwieters et al., 2003 |
https://nmr.cit.nih.gov/xplor-nih/ |
Protein Structure Validation Software suite 1.5 |
Bhattacharya et al., 2007 |
https://psvs-1_5-dev.nesg.org/ |