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. 2019 Nov 30;10(12):988. doi: 10.3390/genes10120988

Table A2.

Genotype and allelic information for candidate genes and its chi-squared goodness-of-fit based global distribution (n = 343).

Candidate Genes SNP Genotype Expected Genotype Frequency Expected N Frequency N Allele Frequency Call Rate, % p-Value
Chi-Squared Goodness-of-Fit
BDNF rs6265 GG 0.466 160 0.334 114 G
A
0.576
0.424
98.9 0.69
GA 0.333 114 0.484 165
AA 0.201 69 0.182 62
OXTR rs53576 AA 0.389 134 0.269 92 A
G
0.515
0.485
98.9 0.68
AG 0.333 114 0.491 168
GG 0.278 95 0.240 82
RORA rs4775340 GG 0.450 155 0.635 217 G
A
0.800
0.200
99.2 0.43
GA 0.333 114 0.330 113
AA 0.217 74 0.035 12
NRG1 rs2919375 TT 0.388 133 0.401 137 T
C
0.634
0.366
99.2 0.86
TC 0.333 114 0.465 159
CC 0.279 96 0.135 46
TPH2 rs1843809 TT 0.514 177 0.915 312 T
G
0.958
0.042
99.2 0.43
GT 0.333 114 0.085 29
GG 0.153 52 0.000 0
LHPP rs35936514 CC 0.593 204 0.474 162 C
T
0.683
0.317
99.2 0.45
CT 0.333 114 0.418 143
TT 0.074 25 0.108 37
FBKP5 rs9470080 CC 0.363 125 0.436 150 C
T
0.662
0.338
100 0.73
CT 0.333 114 0.451 155
TT 0.304 104 0.113 39
FBKP5 rs3800373 TT 0.425 146 0.429 145 T
G
0.669
0.331
98.4 0.17
TG 0.333 114 0.479 162
GG 0.242 83 0.092 31
TEX51 rs6733840 TT 0.488 168 0.638 219 C
T
0.796
0.204
99.7 0.68
TC 0.333 114 0.315 108
CC 0.178 61 0.047 16
PLEKHGI rs9372078 AA 0.384 131 0.388 132 A
T
0.624
0.376
98.4 0.78
AT 0.333 114 0.471 160
TT 0.283 97 0.141 48
HTR2C rs6318 GG 0.571 196 0.944 323 G
C
0.971
0.029
99.5 0.63
GC 0.333 114 0.053 18
CC 0.095 33 0.003 1
EPHX2 rs17466684 GG 0.536 184 0.755 259 G
A
0.864
0.136
99.7 0.19
GA 0.333 114 0.219 75
AA 0.131 45 0.026 9
ANO2 rs12579350 GG 0.541 186 0.860 297 G
A
0.923
0.077
100.0 0.28
GA 0.333 114 0.125 43
AA 0.126 43 0.009 3
NPY5R rs12501691 TT 0.613 210 0.682 234 T
A
0.831
0.169
99.5 0.18
TA 0.333 114 0.297 102
AA 0.054 19 0.020 7
SDK2 rs3816995 GG 0.406 140 0.617 211 G
A
0.779
0.221
99.2 0.39
GA 0.333 114 0.325 111
AA 0.260 89 0.058 20