Table 2.
Common features of eRNAs | Selected References | Comments |
---|---|---|
Produced at active enhancers | [21,82,104] | |
Non-coding transcripts | [78–80] | |
Transcribed by RNA Pol II | [8,78,82,88–90]. | |
Not spliced | [81,96,97] | Spliced eRNA: [14] |
Lack of polyadenylation | [78,90,96,100,101] | eRNAs with polyadenylation: [80,96] |
Cell-type specific | [21,82,104] | |
Bidirectional transcription | [79,81–84] | Unidirectional transcription: [78,80,85–87] |
Degraded by RNA Exosome | [78,90,96,100,101] | |
Regulated by Integrator | [95] | |
Average size 2kb – 5kb | [78–80] | |
Bind transcription factors | [58,89,98,117,126–131] | |
Release paused RNA Pol II | [90,133–135] | |
Contribute to enhancer-promoter looping | [63,89,92,94,99,108,142] | Exceptions: [82,90,143] |
Interfere with transcriptional repressors | [90] |