Table 3.
The list of genes related to GI 2 and GI 4 of subsp. pallidum. The table shows the list of proteins excluding the hypothetical proteins
| Protein ID | GI 2 and GI 4 Coordinates | Protein Name | Functions (MF: Molecular Function, BP: Biological Process) |
|---|---|---|---|
| WP_010881790.1 | 365,067–365,627 | cytidylate kinase |
MF: ATP binding, cytidylate kinase activity BP: pyrimidine nucleotide metabolic process. |
| WP_010881791.1 | 365,621–366,454 | adenine glycosylase |
MF: catalytic activity. DNA binding. BP: base-excision repair. |
| WP_010881792.1 | 366,459–369,881 | transcription-repair coupling factor |
MF: ATP binding, damaged DNA binding, hydrolase activity. BP: regulation of transcription, DNA-template, transcription-coupled nucleotide-excision repair. |
| WP_010881793.1 | 370,034–371,125 | phospho-N-acetylmuramoyl-pentapeptide- transferase |
MF: phospho-N-acetylmuramoyl-pentapeptide-transferase activity, UDP-N-acetylmuramoyl-L-alanyl-D-glutamyl-meso-2, transferase activity. BP:cell cycle, cell divisio, cell wall organization. |
| WP_010881797.1 | 373,895–374,425 | FKBP-type peptidyl-prolyl cis-trans isomerase |
MF: Metal ion binding, peptidyl-prolyl sis-trans isomerase activity. BP: protein refolding |
| WP_010881798.1 | 374,639–375,925 | gamma-glutamyl-phosphate reductase |
MF: glutamate-5semialdehyde dehydrogenase activity. BP: L-proline biosynthetic process. |
| WP_010881799.1 | 375,922–376,812 | glutamate 5-kinase |
MF: ATP-binding BP: L-proline biosynthetic process. |
| WP_010881801.1 | 377,198–377,707 | ribonuclease H | MF: Metal-ion binding, nucleic acid binding |
| WP_010881802.1 | 377,970–378,596 | thymidylate kinase |
MF: ATP binding, thymidylate kinase activity. BP: dTDP biosynthetic process |
| WP_010881806.1 | 377,970–378,596 | glycosyl hydrolase |
MF: catalytic activity. BP: carbohydrate metabolic process. |
| WP_014342391.1 | 382,926–383,729 | lysophosphatidic acid acyltransferase |
MF: transferase activity. BP: metabolic process |
| WP_014505476.1 | 384,584–387,016 | chemotaxis protein CheA |
MF: ATP bindinf, phosphorelay sensor kinase activity BP: chemotaxis. |
| WP_010881907.1 | 488,333–488,911 | SMC-Scp complex subunit ScpB | BP: cell division, chromosome separation |
| WP_014342436.1 | 488,928–489,725 | RsuA family pseudouridine synthase | MF: pseudouridine synthase activity, RNA binding. |
| WP_010881910.1 | 490,476–490,835 | transcriptional regulator | |
| WP_010881913.1 | 492,278–493,030 | tRNA (guanine-N(7)-)-methyltransferase | MF: tRNA (guanine-N7-)-methyltransferase activity. |