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. 2018 Sep 20;20(6):2299–2305. doi: 10.1093/bib/bby080

Figure 4.

Figure 4

Comparison of top-scored peptide models obtained with contact information (cyan), without contact information (yellow) and experimental structures (magenta). The figure presents the lowest resolution models out of the 10 top-scored models for the example modeling cases (PDB IDs are given in the picture). The following improvement has been noted in terms of peptide-RMSD values (between docking without and with contact information): 1GY7, from 13.71 to 3.21 Å; 1 IE9, from 12.85 to 1.23 Å; 1R6J, from 8.31 to 1.37 Å; 2DS7, from 11.24 to 2.33 Å; 2I3I, from 9.40 to 2.27 Å; 3TX7, from 8.25 to 3.58 Å.