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. 2020 Jan 10;18:21. doi: 10.1186/s12967-020-02210-5

Table 1.

Relative expression of selected DEGs in ToF vs ASD specimens

Function Gene symbol Gene description Fold changea
ToF
Matrix organization and cell adhesion ELN Elastin 3.9
POSTN Periostin, osteoblast specific factor 3.6
ADAMTS5 ADAM metallopeptidase with thrombospondin type 1 motif, 5 3.6
COL1A1 Collagen, type I, alpha 1 3.5
COL1A2 Collagen, type I, alpha 2 2.8
ADAMTS2 ADAM metallopeptidase with thrombospondin type 1 motif, 2 2.8
COL5A1 Collagen, type V, alpha 1 2.7
VCAN Versican 2.7
COL5A2 Collagen, type V, alpha 2 2.6
MMP16 Matrix metallopeptidase 16 (membrane-inserted) 2.5
NID1 Nidogen 1 2.3
COL4A4 Collagen, type IV, alpha 4 2.3
COL4A1 Collagen, type IV, alpha 1 2.1
THBS1 Thrombospondin 1 2.1
LAMA2 Laminin, alpha 2 2.1
Trascription factors EGR1 Early growth response 1 4.5
FOS FBJ murine osteosarcoma viral oncogene homolog 4.0
HIF3A Hypoxia inducible factor 3, alpha subunit 2.2
IER2 Immediate early response 2 2.1
NFIL3 Nuclear factor, interleukin 3 regulated 2.0
ASD
Muscle development and contraction ACTA1 Actin, alpha 1, skeletal muscle 9.6
NEB Nebulin 7.9
MYOT Myotilin 6.4
MYL3 Myosin, light chain 3, alkali; ventricular, skeletal, slow 5.3
KLHL41 Kelch-like family member 41 4.8
MUSTN1 Musculoskeletal, embryonic nuclear protein 1 4.1
PPP1R3A Protein phosphatase 1, regulatory subunit 3A 3.9
ENO3 Enolase 3 (beta, muscle) 3.6
SYNPO2 Synaptopodin 2 3.4
MYH11 Myosin, heavy chain 11, smooth muscle 2.0
MURC Muscle-related coiled-coil protein 2.0

Comparative analysis of gene expression in ToF and ASD samples was conducted as described in “Methods” section. A function, a gene symbol, a brief gene description, and the fold change values are specified for each gene

Genes for each functional category are ordered according to decreasing fold changes

aFold change ≥ 2 are considered significant