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. 2020 Jan 12;6(1):vez057. doi: 10.1093/ve/vez057

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© The Author(s) 2020. Published by Oxford University Press.

This is an Open Access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0/), which permits unrestricted reuse, distribution, and reproduction in any medium, provided the original work is properly cited.

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Figure 1. — The genomic organisations of simian foamy virus Pan troglodytes schweinfurthii (SFVpsc) (top), consensus ERV-Spuma-Cbo (middle), and ERV-Spuma.1-Hha (bottom). Under each schematic diagram are the distributions of stop (red) and start (green) codons in the six-translation frames (+1, +2, +3, −1, −2, and −3; from top to bottom). Potential open reading frames are shown in purple, and were used to determine potential protein coding regions (red boxes); gag: group-specific antigen gene; pol: polymerase gene; env: envelope gene; tas: transcriptional transactivator gene; and bel2: bel-2 gene. Long-terminal repeats (LTRs) are shown in grey. Other identified genomic elements including primer binging sites (PBS) and internal promoters are shown. The vertical transparent grey strip indicates a region of undetermined nucleotide sequences. The scale bar (bottom left) represents a nucleotide length of 1,000 bases.