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. 2020 Jan 6;94(2):e01363-19. doi: 10.1128/JVI.01363-19

TABLE 2.

Primer sequences to create chimeric RBD plasmidsa

Protein Original plasmid Forward primerb Reverse primerb
MMQ M41-RBD gtcgcttccgtgctagca acaccagrtckccgttcag
QX-RBD ctgaacggmgayctggtgt ctgcttcatgcgcttaattaa
gtcgcttccgtgctagca ctgcttcatgcgcttaattaa
MQM MQQ gtcgcttccgtgctagca acaccagrtckccgttcag
M41-RBD ctgaacggmgayctggtgt ctgcttcatgcgcttaattaa
gtcgcttccgtgctagca ctgcttcatgcgcttaattaa
MQQ M41-RBD gtcgcttccgtgctagca tagcaatgwgtsacgaacactg
QX-RBD cagtgttcgtsacwcattgcta ctgcttcatgcgcttaattaa
gtcgcttccgtgctagca ctgcttcatgcgcttaattaa
QQM QX-RBD gtcgcttccgtgctagca acaccagrtckccgttcag
M41-RBD ctgaacggmgayctggtgt ctgcttcatgcgcttaattaa
gtcgcttccgtgctagca ctgcttcatgcgcttaattaa
QMQ QMM gtcgcttccgtgctagca acaccagrtckccgttcag
QX-RBD ctgaacggmgayctggtgt ctgcttcatgcgcttaattaa
gtcgcttccgtgctagca ctgcttcatgcgcttaattaa
QMM QX-RBD gtcgcttccgtgctagca tagcaatgwgtsacgaacactg
M41-RBD cagtgttcgtsacwcattgcta ctgcttcatgcgcttaattaa
gtcgcttccgtgctagca ctgcttcatgcgcttaattaa
M41-SGS M41-RBD atctgatggatgtcccatcacc ccggacttatagcaatgtgtcacg
M41-KIP M41-RBD tcctaagaactttctgcgggtgtc atcttgccggtgatgggacatcc
M41-SGS-KIP M-SGS tcctaagaactttctgcgggtgtc atcttgccggtgatgggacatcc
QX-Y QX-RBD ctgtcccatcaccggcaag tacccggagctgtagcaatg
QX-MLQ QX-RBD gcagcgggaccacatcagaatttc agcatgccggtgatgggacaaga
QX-Y-MLQ Q-Y gcagcgggaccacatcagaatttc agcatgccggtgatgggacaaga
a

R, nt A/G; K, nt G/T; M, nt A/C; Y, nt C/T; W, nt A/T; S, nt C/G.

b

Underlined sequences indicate nucleotides changed to introduce the mutation.