Table 1.
Statistics of the 3D modeling of glycoside hydrolases identified in halite metagenome.
| Sequence ID |
iTASSER ID | C-Score | TM-Score | RMSD (Å) | GH Family/Activity Associated | Templates (PDB ID) |
Structural Analogs (PDB ID) |
|---|---|---|---|---|---|---|---|
| k141_2995_1_516_- | S461623 | 0.39 | 0.77 ± 0.10 | 4.2 ± 2.8 | GH10/ xylanase |
1vbr, 6fhe, 5ofj, 3emq, 2q8x, 2uwf, 3u7b | 5ofj, 3ms8, 2uwf, 3emc, 1r85, 2f8q, 1clx, 4w8l, 2cnc, 2dpe |
| k141_6861_1_322_+ | S461626 | 0.24 | 0.75 ± 0.11 | 3.6 ± 2.5 | GH43/ arabinofuranosidase |
4qqs, 3kst, 1yrz, 4kca, 4kc7, 5ho0 | 4qqs, 3kst, 5z5d, 1yi7, 5jow, 1yrz, 3qz4, 1yif |
| k141_9036_1_604_- | S461628 | 0.99 | 0.85 ± 0.08 | 3.4 ± 2.4 | GH3/ endo-glycosidase |
5vqd, 5vqe, 3cqm, 1tr9, 3bmx, 5bu9, 3sql |
3nvd, 5qve, 3sqm, 5jp0, 4zm6, 5yot, 5m6g, 3f93, 1iew, 5bu9 |
| k141_10879_1_560_- | S461631 | 0.12 | 0.73 ± 0.11 | 4.9 ± 3.2 | GH5/ endo-1,4-β-mannanase |
1rh9, 4lpy | 1rh9, 3pzm, 4l3m, 1uuq, 4lpy, 3wh9, 1pnp, 3ziz, 4awe, 2xg9 |
| k141_9497_1_728_+ | S461630 | 0.22 | 0.74 ± 0.11 | 5.3 ± 3.4 | GH30/ endo-β-1,6-glucanase xylanase |
3clw, 2v3e, 5ngk, 2wnw | 3clw, 2f61, 2wnw, 5ngk, 6iuj, 4b3k, 3kl3, 5ndx, 5bx9, 5ta0 |
| k141_15375_1_491_- | S461835 | 0.62 | 0.80 ± 0.09 | 3.7 ± 2.5 | GH5/ endo-1,4-β-mannanase |
3pz9, 4l3m, 3wfl, 1rh9, 4lyp | 3pzm, 4l3m, 1rh9, 3wh9, 3wfl, 1qno, 3ziz, 4awe, 1uz4, 4lyp |
| k141_14357_218_1033_- | S461832 | 0.22 | 0.74 ± 0.11 | 5.5 ± 3.5 | GH15/ endo-β-1,2-glucanase glucoamilase α-1, 2-mannosidase |
5gzh, 5z06, 4gl3 | 5gzh, 5z06, 4gl3, 3eu8, 6imu, 6fhw, 2vn4, 1gly, 1dl2 |
| k141_11065_1_594_- | S461829 | 1.30 | 0.89 ± 0.07 | 2.8 ± 2.0 | GH3/ endoglucanase β-xylosidase |
5yot, 5z9s, 5jp0, 5z87 | 5z87, 5yot, 5jp0, 5z9s, 5a7m, 4zo6, 1ex1, 3u48, 5m6g, 3ut0 |
| k141_3756_1_1250_- | S461624 | 0.92 | 0.60 ± 0.14 | 9.0 ± 4.6 | GH10/ endo-β-1,4-xylanase |
1isy, 2cnc, 4l4o, lisv, 4k68, 2q8x, 1vbr | 1isy, 4w8l, 1us2, 2cnc, 5ofj, 3ms8, 3emz, 4l4o, 4k68 |
| k141_827_1470_3344_- | S461622 | 0.03 | 0.71 ± 0.12 | 7.9 ± 4.4 | GH55/ β-1,3-glucanase |
5m5z, 3eqn | 3eqn, 5m5z, 4pew, 5gkd, 5ggc, 1ofl, 1rmg, 5z9t, 4oj5, 3zzp |
| k141_13601_1_1245_- | S461831 | 0.81 | 0.61 ± 0.14 | 8.7 ± 6.4 | G51/ arabinofuranosidase glucanase-xylanase |
6d25, 2vrq | 6d25, 2vrq, 2c8n, 2y2w, 1pz3, 3ug4, 3vny, 5bwi, 3ii1, 2j25 |
| k141_19777_314_775_- | S462092 | 0.44 | 0.77 ± 0.10 | 3.9 ± 2.7 | GH5/ endo-1,4-β-mannanase |
4l3m, 1rh9, 3wh9 | 4l3m, 3pzm, 1rh9, 4awe, 3wh9, 3wfl, 3ziz, 1qnp, 1uuq, 4lyp |
| k141_35613_1609_2534_- | S466607 | 0.63 | 0.80 ± 0.09 | 4.9 ± 3.2 | GH30/ β-glucosidase |
3clw, 6iuj, 2v3e, | 3clw, 6iuj, 2c8n, 1pz3, 2f61, 3kl0, 4qaw, 5cxp, 6d25, 4fmv |
| k141_39467_1_958_- | S466608 | 0.18 | 0.74 ± 0.11 | 5.9 ± 3.7 | GH10/ endoxylanase |
1xyz, 5ofj, 3wub, 4k68, 2q8x, 2uwf | 1hiz, 6fhf, 2fgl, 2uwf, 5ofj, 3msd, 3emc, 4l4o, 1us3, 4w81 |
| k141_40844_1_1278_+ | S466609 | 0.83 | 0.83 ± 0.08 | 5.2 ± 3.3 | GH51/ α-N-arabinofuranosidase |
6d25, 2vrq | 6d25, 2vrq, 1p23, 2c8n, 2y2w, 3s2c, 3vo0, 3ik2, 2yjg, 3fw6 |
| k141_42666_1_1020_- | S466610 | 1.27 | 0.89 ± 0.07 | 3.9 ± 2.6 | GH3/ β-N-acetylglucosaminidase |
3sq1, 3cqm, 4zm6, 5vqd | 3sql, 3sqm, 3nvd, 5vqd, 4zm6, 5jp0, 5m6g, 1iew, 5yot, 5bu9 |
| k141_46724_1_745_+ | S466611 | 0.37 | 0.76 ± 0.10 | 5.0 ± 3.2 | GH5/ endo-1,4-β-mannanase |
1rh9, 1uuq, 4lpy, 4l3m | 1rh9, 4l3m, 3pzg, 1uz4, 3wh9, 4awe, 3wfl, 1qno, 3ziz, 4lyp |