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Concordance of calls for arcasHLA, OptiType and HISAT-genotype with xHLA for 447 RNA samples from 69 individuals
| Input (#) | RNA (447) |
WES (69) |
||
|---|---|---|---|---|
| Tool | arcasHLA | OptiType | OptiType | HISAT |
| A | 97.5% | 95.2% | 98.6% | 99.4% |
| B | 98.0% | 94.5% | 96.4% | 98.6% |
| C | 97.7% | 97.4% | 98.6% | 100.0% |
| DPB1 | 94.2% | — | — | — |
| DQB1 | 93.3% | — | — | 94.9% |
| DRB1 | 94.9% | — | — | 94.2% |
Note: Bold denotes maximized concordance for RNA sequencing results.
