Table 3. Details of microbiologic testing procedures.
NR = not reported; API = analytical profile index; MALDI-TOF = Matrix-Assisted Laser Desorption/Ionization-Time of Flight.
| Study | Sample type | Screening method | Speciation
method |
ESBL confirmation
method |
|---|---|---|---|---|
| Ruppe 2009 | Stool | Drigalski and chromagar | NR | Double disc |
| Tande 2009 | Stool | Drigalski with cephalosporin | API | Double disc |
| Andriatahina 2010 | Rectal Swab | Drigalski with cephalosporin | API | Double disc |
| Herindrainy 2011 | Stool | Drigalski with cephalosporin | API | Double disc |
| Woerther 2011 | Stool | Chromagar | API | PCR |
| Albrechtova 2012 | Rectal Swab | Mackonkey with cephalosporin | API | Double disc |
| Isendahl 2012 | Rectal Swab | Chromagar | Vitek | Vitek |
| Lonchel 2012 | Stool | Mackonkey or Drigalski and cephalosporin | MALDI-TOF | Double disc |
| Lonchel 2013 | Stool | Mackonkey or Drigalski and cephalosporin | MALDI-TOF | Double disc |
| Magoue 2013 | Stool | Mackonkey or Drigalski and cephalosporin | NR | Double disc |
| Schaumburg 2013 | Rectal Swab | Chromagar | Vitek | Double disc |
| Nelson 2014 | Rectal Swab | Mackonkey with cephalosporin | Biochemical | Double disc |
| Chereau 2015 | Stool | Drigalski with cephalosporin | API | Double disc |
| Desta 2016 | Stool | Chromagar | Vitek | Vitek |
| Djuikoue 2016 | Stool | Drigalski with cephalosporin | MALDI-TOF | Double disc |
| Farra 2016 | Stool | Chromagar | NR | Double disc |
| Kurz 2016 | Rectal Swab | Chromagar | API | Combination disc |
| Mshana 2016 | Stool | Mackonkey with cephalosporin | API | Chromagar and vitek |
| Ribeiro 2016 | Stool | Chromagar | MALDI-TOF | PCR |
| Tellevik, 2016 | Stool | Chromagar | MALDI-TOF | Combination disc |
| Magwenzi 2017 | Stool or
Rectal Swab |
Chromagar and Mackonkey with cephalosporin
and nutrient broth with cephalosporin |
API | Double disc |
| Moremi 2017 | Stool | Mackonkey with cephalosporin | Biochemical | Double disc |
| Wilmore 2017 | Stool | CLEDwith cephalosproin | API and
MALDI |
Combination disc |
| Chirindze 2018 | Stool | Mackonkey with cephalosporin | API | Double disc |
| Founou 2018 | Rectal Swab | Mackonkey with cephalosporin | API | Combination disc |
| Herindrainy 2018 | Stool or
Rectal Swab |
Chromagar | MALDI-TOF | Double disc |
| Katakweba 2018 | Stool | Mackonkey with cephalosporin | MALDI-TOF | Double disc |
| Marando 2018 | Rectal swab | Mackonkey with cephalosporin | Biochemical | Double disc |
| Moremi 2018 | Rectal swab | Mackonkey with cephalosporin | vitek | vitek |
| Nikema Pessinaba
2018 |
Stool | Drigalski with cephalosporin | NR | NR |
| Sanneh 2018 | Stool | Drigalski And Cephalosporin | NR | Double disc |
| Stanley 2018 | Stool | AST | BD phoenix | BD phoenix |