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. 2020 Jan 13;37(1):85–103.e9. doi: 10.1016/j.ccell.2019.12.003
REAGENT or RESOURCE SOURCE IDENTIFIER
Antibodies

pT202/Y204-p44/42 (ERK1/2) Cell Signaling Technology Cat# 4370; RRID:AB_2315112
pThr18/Ser19-MLC2 Cell Signaling Technology Cat# 3674; RRID: AB_2147464
pSer19-MLC2 Cell Signaling Technology Cat# 3671; RRID: AB_330248
MLC2 Cell Signaling Technology Cat# 3672; RRID: AB_10692513
PD-L1 clone E1L3N Cell Signaling Technology Cat# 13684; RRID:AB_2687655
pY705-STAT3 Cell Signaling Technology Cat# 9145; RRID:AB_2491009
ERK2 Santa Cruz Biotechnology Cat# sc-154; RRID:AB_2141292
GAPDH Santa Cruz Biotechnology Cat# MAB374; RRID:AB_2107445
GFP Santa Cruz Biotechnology Cat# sc-8334; RRID:AB_641123
MCL-1 Santa Cruz Biotechnology Cat# sc-819; RRID:AB_2144105
STAT3 Santa Cruz Biotechnology Cat# sc-482; RRID:AB_632440
Rat IgG2a anti-PD-1 clone RMP1-14 BioXCell Cat# BE0146; RRID:AB_10949053
Rat IgG2a isotype control clone 2A3 BioXCell Cat# BE0089; RRID:AB_1107769
CD206 Abcam Cat# ab64693; RRID:AB_1523910
CD3 anti-mouse Abcam Cat# ab134096
CD4 anti-mouse, clone I3T4 Abcam Cat# ab183685; RRID:AB_2686917
FoxP3 anti-human, clone 236A/E7 Abcam Cat# ab20034; RRID:AB_445284
P-H2A.X (S139) Abcam Cat# ab2893; RRID:AB_303388
CD8a anti-mouse, clone Ly2 Invitrogen Cat# 14-0808-82; RRID:AB_2572861
F4/80 anti-mouse, clone BM8 Invitrogen Cat# MF48000; RRID:AB_10376289
FoxP3 anti-mouse, clone FJK-16s Invitrogen Cat# 14-5773-82; RRID:AB_467576
CD4 anti-human, clone 11E9 Novocastra Cat# NCL-L-CD4-368; RRID:AB_563559

Biological Samples

Human melanoma pre-/post-therapy Paul Lorigan, Richard Marais N/A

Chemicals, Peptides, and Recombinant Proteins

PLX4720 Selleck #S1152
PLX4032 Selleck #S1267
GSK2118436 Dabrafenib ChemieTek #CT-DABRF
GSK1120212 Trametinib Selleck #S2673
PD184352 Selleck #S1020
AZD6244 Selleck #S1008
SCH772984 Selleck #S7101
GSK269962A Axon MedChem # Axon 1167
H1152 Calbiochem #555550
AT13148 Selleck #S7563
(±)-Blebbistatin Calbiochem #203390

Critical Commercial Assays

Human/Mouse TGF-β1 ELISA Biolegend #436707
Trichrome Stain (Masson) Kit Sigma #HT15-1KT
Bouin’s solution Sigma #HT10132
Weigert’s iron hematoxylin solution Sigma # HT1079

Deposited Data

Mass spectrometry A375 MEKi 24h This study ProteomeXchange via PRIDE repository
Project # PXD002621 (https://www.ebi.ac.uk/pride/archive/projects/PXD002621)

Experimental Models: Cell Lines

Human: A375 ATCC ATCC Cat# CRL-7904; RRID:CVCL_0132
Human: Colo829 ATCC ATCC Cat# CRL-1974; RRID:CVCL_1137
Human: SKMEL5 ATCC ATCC Cat# HTB-70; RRID:CVCL_0527
Human: WM88 Coriell Institute Coriell Cat# WC00123; RRID:CVCL_6805
Human: WM983A Coriell Institute Coriell Cat# WC00048; RRID:CVCL_6808
Human: WM983B Coriell Institute Coriell Cat# WC00066; RRID:CVCL_6809
Human: WM793B Coriell Institute Coriell Cat# WC00062; RRID:CVCL_8787
Human: A375M2 Richard Hynes Clark et al., 2000
Human: LOX-IMVI Øystein Fodstad RRID:CVCL_1381
Human: D04 Kevin Harrington RRID:CVCL_H604
Human: MM485 Wellcome Trust Functional Genomics Cell Bank RRID:CVCL_2610
Human: A375/PLX/R Richard Marais RRID:CVCL_IW10
Baenke et al., 2015
Human: Colo829/PLX/R Richard Marais RRID:CVCL_IW11
Baenke et al., 2015
Human: A375/D+T/R Richard Marais N/A
Human: Patient #2 Richard Marais N/A
Human: Patient #35 Richard Marais N/A
Human: Patient #62T3 Richard Marais N/A
Human: Patient #58 Richard Marais N/A
Human: Patient #33 Richard Marais N/A
Mouse: 5555 Richard Marais Dhomen et al., 2009, Hirata et al., 2015
Mouse: 5555-anti-PD-1/NR This paper N/A
Mouse: 4434 Richard Marais Dhomen et al., 2009, Hirata et al., 2015
Mouse: 4599 Richard Marais Dhomen et al., 2009, Hirata et al., 2015
Mouse: 690cl2 Richard Marais Dhomen et al., 2009
Human: HEK293T Jeremy Carlton ATCC Cat# CRL-3216; RRID:CVCL_0063

Experimental Models: Organisms/Strains

Mouse: CD-1 nu/nu Charles River UK RRID:IMSR_CRL:086
Mouse: NOD/SCID/IL-2Rγ-/- (NSG) Charles River UK RRID:IMSR_JAX:005557
Mouse: C57BL/6J Charles River UK RRID:IMSR_JAX:000664

Oligonucleotides

See Table S7 for RNAi sequences Dharmacon

Recombinant DNA

pEGFP-N3-EGFP Fernando Calvo Takara, Clontech #U57609
pEGFP-N3-MLC2-EGFP (rat MLC2) Fernando Calvo Calvo et al., 2013
pEGFP-N3-MLC2-TASA (T18A S19A) -EGFP Fernando Calvo Calvo et al., 2013
pEGFP-N3-MLC2-TDSD (T18D S19D) -EGFP Fernando Calvo Calvo et al., 2013
pLVX-EGFP Erik Sahai, Tohru Takaki Takara, Clontech #632164
pLVX-MLC2-EGFP Erik Sahai, Tohru Takaki Takaki et al., 2017
pLVX-MLC2-TASA (T18A S19A)-EGFP Erik Sahai, Tohru Takaki Takaki et al., 2017
pLVX-MLC2-TDSD (T18A S19A)-EGFP Erik Sahai, Tohru Takaki Takaki et al., 2017

Software and Algorithms

GSEA, ssGSEA Broad Institute http://www.broadinstitute.org/gsea/index.jsp N/A
ImageJ https://imagej.nih.gov/ij/ N/A
GraphPad Prism 8 GraphPad Software N/A
SPSS IBM N/A