REAGENT or RESOURCE | SOURCE | IDENTIFIER |
---|---|---|
Antibodies | ||
pT202/Y204-p44/42 (ERK1/2) | Cell Signaling Technology | Cat# 4370; RRID:AB_2315112 |
pThr18/Ser19-MLC2 | Cell Signaling Technology | Cat# 3674; RRID: AB_2147464 |
pSer19-MLC2 | Cell Signaling Technology | Cat# 3671; RRID: AB_330248 |
MLC2 | Cell Signaling Technology | Cat# 3672; RRID: AB_10692513 |
PD-L1 clone E1L3N | Cell Signaling Technology | Cat# 13684; RRID:AB_2687655 |
pY705-STAT3 | Cell Signaling Technology | Cat# 9145; RRID:AB_2491009 |
ERK2 | Santa Cruz Biotechnology | Cat# sc-154; RRID:AB_2141292 |
GAPDH | Santa Cruz Biotechnology | Cat# MAB374; RRID:AB_2107445 |
GFP | Santa Cruz Biotechnology | Cat# sc-8334; RRID:AB_641123 |
MCL-1 | Santa Cruz Biotechnology | Cat# sc-819; RRID:AB_2144105 |
STAT3 | Santa Cruz Biotechnology | Cat# sc-482; RRID:AB_632440 |
Rat IgG2a anti-PD-1 clone RMP1-14 | BioXCell | Cat# BE0146; RRID:AB_10949053 |
Rat IgG2a isotype control clone 2A3 | BioXCell | Cat# BE0089; RRID:AB_1107769 |
CD206 | Abcam | Cat# ab64693; RRID:AB_1523910 |
CD3 anti-mouse | Abcam | Cat# ab134096 |
CD4 anti-mouse, clone I3T4 | Abcam | Cat# ab183685; RRID:AB_2686917 |
FoxP3 anti-human, clone 236A/E7 | Abcam | Cat# ab20034; RRID:AB_445284 |
P-H2A.X (S139) | Abcam | Cat# ab2893; RRID:AB_303388 |
CD8a anti-mouse, clone Ly2 | Invitrogen | Cat# 14-0808-82; RRID:AB_2572861 |
F4/80 anti-mouse, clone BM8 | Invitrogen | Cat# MF48000; RRID:AB_10376289 |
FoxP3 anti-mouse, clone FJK-16s | Invitrogen | Cat# 14-5773-82; RRID:AB_467576 |
CD4 anti-human, clone 11E9 | Novocastra | Cat# NCL-L-CD4-368; RRID:AB_563559 |
Biological Samples | ||
Human melanoma pre-/post-therapy | Paul Lorigan, Richard Marais | N/A |
Chemicals, Peptides, and Recombinant Proteins | ||
PLX4720 | Selleck | #S1152 |
PLX4032 | Selleck | #S1267 |
GSK2118436 Dabrafenib | ChemieTek | #CT-DABRF |
GSK1120212 Trametinib | Selleck | #S2673 |
PD184352 | Selleck | #S1020 |
AZD6244 | Selleck | #S1008 |
SCH772984 | Selleck | #S7101 |
GSK269962A | Axon MedChem | # Axon 1167 |
H1152 | Calbiochem | #555550 |
AT13148 | Selleck | #S7563 |
(±)-Blebbistatin | Calbiochem | #203390 |
Critical Commercial Assays | ||
Human/Mouse TGF-β1 ELISA | Biolegend | #436707 |
Trichrome Stain (Masson) Kit | Sigma | #HT15-1KT |
Bouin’s solution | Sigma | #HT10132 |
Weigert’s iron hematoxylin solution | Sigma | # HT1079 |
Deposited Data | ||
Mass spectrometry A375 MEKi 24h | This study | ProteomeXchange via PRIDE repository Project # PXD002621 (https://www.ebi.ac.uk/pride/archive/projects/PXD002621) |
Experimental Models: Cell Lines | ||
Human: A375 | ATCC | ATCC Cat# CRL-7904; RRID:CVCL_0132 |
Human: Colo829 | ATCC | ATCC Cat# CRL-1974; RRID:CVCL_1137 |
Human: SKMEL5 | ATCC | ATCC Cat# HTB-70; RRID:CVCL_0527 |
Human: WM88 | Coriell Institute | Coriell Cat# WC00123; RRID:CVCL_6805 |
Human: WM983A | Coriell Institute | Coriell Cat# WC00048; RRID:CVCL_6808 |
Human: WM983B | Coriell Institute | Coriell Cat# WC00066; RRID:CVCL_6809 |
Human: WM793B | Coriell Institute | Coriell Cat# WC00062; RRID:CVCL_8787 |
Human: A375M2 | Richard Hynes | Clark et al., 2000 |
Human: LOX-IMVI | Øystein Fodstad | RRID:CVCL_1381 |
Human: D04 | Kevin Harrington | RRID:CVCL_H604 |
Human: MM485 | Wellcome Trust Functional Genomics Cell Bank | RRID:CVCL_2610 |
Human: A375/PLX/R | Richard Marais | RRID:CVCL_IW10 Baenke et al., 2015 |
Human: Colo829/PLX/R | Richard Marais | RRID:CVCL_IW11 Baenke et al., 2015 |
Human: A375/D+T/R | Richard Marais | N/A |
Human: Patient #2 | Richard Marais | N/A |
Human: Patient #35 | Richard Marais | N/A |
Human: Patient #62T3 | Richard Marais | N/A |
Human: Patient #58 | Richard Marais | N/A |
Human: Patient #33 | Richard Marais | N/A |
Mouse: 5555 | Richard Marais | Dhomen et al., 2009, Hirata et al., 2015 |
Mouse: 5555-anti-PD-1/NR | This paper | N/A |
Mouse: 4434 | Richard Marais | Dhomen et al., 2009, Hirata et al., 2015 |
Mouse: 4599 | Richard Marais | Dhomen et al., 2009, Hirata et al., 2015 |
Mouse: 690cl2 | Richard Marais | Dhomen et al., 2009 |
Human: HEK293T | Jeremy Carlton | ATCC Cat# CRL-3216; RRID:CVCL_0063 |
Experimental Models: Organisms/Strains | ||
Mouse: CD-1 nu/nu | Charles River UK | RRID:IMSR_CRL:086 |
Mouse: NOD/SCID/IL-2Rγ-/- (NSG) | Charles River UK | RRID:IMSR_JAX:005557 |
Mouse: C57BL/6J | Charles River UK | RRID:IMSR_JAX:000664 |
Oligonucleotides | ||
See Table S7 for RNAi sequences | Dharmacon | |
Recombinant DNA | ||
pEGFP-N3-EGFP | Fernando Calvo | Takara, Clontech #U57609 |
pEGFP-N3-MLC2-EGFP (rat MLC2) | Fernando Calvo | Calvo et al., 2013 |
pEGFP-N3-MLC2-TASA (T18A S19A) -EGFP | Fernando Calvo | Calvo et al., 2013 |
pEGFP-N3-MLC2-TDSD (T18D S19D) -EGFP | Fernando Calvo | Calvo et al., 2013 |
pLVX-EGFP | Erik Sahai, Tohru Takaki | Takara, Clontech #632164 |
pLVX-MLC2-EGFP | Erik Sahai, Tohru Takaki | Takaki et al., 2017 |
pLVX-MLC2-TASA (T18A S19A)-EGFP | Erik Sahai, Tohru Takaki | Takaki et al., 2017 |
pLVX-MLC2-TDSD (T18A S19A)-EGFP | Erik Sahai, Tohru Takaki | Takaki et al., 2017 |
Software and Algorithms | ||
GSEA, ssGSEA | Broad Institute http://www.broadinstitute.org/gsea/index.jsp | N/A |
ImageJ | https://imagej.nih.gov/ij/ | N/A |
GraphPad Prism 8 | GraphPad Software | N/A |
SPSS | IBM | N/A |