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. 2020 Jan 13;21:37. doi: 10.1186/s12864-019-6440-4

Table 2.

Primers used for qRT-PCR verification of the miRNAs and target genes

Primer name Sequence (5′-3′) Primer name Sequence (5′-3′)
sly-miR156e-3p GCTTACTCTCTATCTGTCACC Solyc01g080150.2-F TCCTCCTTCATCGTCAAC
sly-miR156e-5p TAGCCAAGGATGACTTGCCTG Solyc01g080150.2-R AGAGTAGTAGTTCCATTCTTCC
sly-miR169b CAGCCAAGGATGACTTGCCGA Solyc11g019860.1-F CAAGCGTAATACTCGTATGT
sly-miR169c TAGCCAAGGATGACTTGCCTA Solyc11g019860.1-R GCTTCGTCAGTATCTTCTTC
sly-miR169d TAGCCAAGGATGACTTGCCTTT Solyc06g068930.1-F TCAAGAATCTCGTCAACCT
sly-miR169e-5p TGTTGGTGAGAGTTCGATTCTC Solyc06g068930.1-R GCAGCAGGAAGTGAAGTA
sly-miR1918 TGTTGGTGAGAGTTCGATTCTC Solyc08g082260.1-F GTAGTCGTGGTGTTGCTA
sly-miR394-3p AGGTGGGCATACTGTCAACA Solyc08g082260.1-R CTGGCTCTGGTATCACAA
sly-miR5302a AAACGAGGTTTGTTACTTTGG Solyc09g097880.2-F CTGGCTATTAGTGAGAAGAATC
sly-miR5302b-5p TGAAATGCTATAGTTGGAAAGT Solyc09g097880.2-R GACGCATCTGTTCCAATAC
sly-miR9472-3p TTCACAATCTCTGCTGAAAAA Solyc06g050510.2-F GAGAGGTGGCTGTGTTAT
sly-miR9474-5p TGTAGAAGTCATGAATAAAATG Solyc06g050510.2-R CCAGGTGTAGAGTGTTGT
sly-miR9477-3p TTGGGAAAGGGAACAACTGATAGT Solyc08g067260.2-F AGTAGAAGTTGGAGGAGATG
sly-miR9478-5p GCTTAAATATGTAGATCGAACT Solyc08g067260.2-R AGACACAGAAGTGCTCAA
sly-miR9479-5p TCCAGTCCTCTACCCTTCTCCA Solyc08g081340.2-F ATAGGATGGCAGGAGGTA
unconservative_1_1767 AAGAAAAACGACUGAAUAUAAAUC Solyc08g081340.2-R CAAGACGATGGTAAGACAAC
unconservative_1_301 AUUGCGAUGAUUAUGUUCAACCCU Solyc02g084360.2-F GCTTGATAACCGATGCTAG
unconservative_5_19580 AUGGUGUCUGGCUGUUAUUUCAGC Solyc02g084360.2-R GATGCGACTCATTATTGGAA
unconservative_9_35275 AUAUACAAAUUUCUGCUCAUUUCG Solyc01g090440.2-F GAGATGACTATGAAGAGGATGA
unconservative_9_37129 AUCUGUAUCUAGAAUUCAAAGUCU Solyc01g090440.2-R GAAGAGGATATTGGTGAGATTG
U6 AACAGTCTGACTTGTCCCTTC Actin4-F GAGGATATTCAGCCCCTTGTTTG
Universal reverse primer

GCATAGACCTGAATGGCGGTAAGG

GTGTGGTAGGCGAGACATTTTTTTTTTTTTTTTTTTT

Actin4-R CATCTTTCTGACCCATTCCAACC