Table 2.
Primers used for qRT-PCR verification of the miRNAs and target genes
| Primer name | Sequence (5′-3′) | Primer name | Sequence (5′-3′) |
|---|---|---|---|
| sly-miR156e-3p | GCTTACTCTCTATCTGTCACC | Solyc01g080150.2-F | TCCTCCTTCATCGTCAAC |
| sly-miR156e-5p | TAGCCAAGGATGACTTGCCTG | Solyc01g080150.2-R | AGAGTAGTAGTTCCATTCTTCC |
| sly-miR169b | CAGCCAAGGATGACTTGCCGA | Solyc11g019860.1-F | CAAGCGTAATACTCGTATGT |
| sly-miR169c | TAGCCAAGGATGACTTGCCTA | Solyc11g019860.1-R | GCTTCGTCAGTATCTTCTTC |
| sly-miR169d | TAGCCAAGGATGACTTGCCTTT | Solyc06g068930.1-F | TCAAGAATCTCGTCAACCT |
| sly-miR169e-5p | TGTTGGTGAGAGTTCGATTCTC | Solyc06g068930.1-R | GCAGCAGGAAGTGAAGTA |
| sly-miR1918 | TGTTGGTGAGAGTTCGATTCTC | Solyc08g082260.1-F | GTAGTCGTGGTGTTGCTA |
| sly-miR394-3p | AGGTGGGCATACTGTCAACA | Solyc08g082260.1-R | CTGGCTCTGGTATCACAA |
| sly-miR5302a | AAACGAGGTTTGTTACTTTGG | Solyc09g097880.2-F | CTGGCTATTAGTGAGAAGAATC |
| sly-miR5302b-5p | TGAAATGCTATAGTTGGAAAGT | Solyc09g097880.2-R | GACGCATCTGTTCCAATAC |
| sly-miR9472-3p | TTCACAATCTCTGCTGAAAAA | Solyc06g050510.2-F | GAGAGGTGGCTGTGTTAT |
| sly-miR9474-5p | TGTAGAAGTCATGAATAAAATG | Solyc06g050510.2-R | CCAGGTGTAGAGTGTTGT |
| sly-miR9477-3p | TTGGGAAAGGGAACAACTGATAGT | Solyc08g067260.2-F | AGTAGAAGTTGGAGGAGATG |
| sly-miR9478-5p | GCTTAAATATGTAGATCGAACT | Solyc08g067260.2-R | AGACACAGAAGTGCTCAA |
| sly-miR9479-5p | TCCAGTCCTCTACCCTTCTCCA | Solyc08g081340.2-F | ATAGGATGGCAGGAGGTA |
| unconservative_1_1767 | AAGAAAAACGACUGAAUAUAAAUC | Solyc08g081340.2-R | CAAGACGATGGTAAGACAAC |
| unconservative_1_301 | AUUGCGAUGAUUAUGUUCAACCCU | Solyc02g084360.2-F | GCTTGATAACCGATGCTAG |
| unconservative_5_19580 | AUGGUGUCUGGCUGUUAUUUCAGC | Solyc02g084360.2-R | GATGCGACTCATTATTGGAA |
| unconservative_9_35275 | AUAUACAAAUUUCUGCUCAUUUCG | Solyc01g090440.2-F | GAGATGACTATGAAGAGGATGA |
| unconservative_9_37129 | AUCUGUAUCUAGAAUUCAAAGUCU | Solyc01g090440.2-R | GAAGAGGATATTGGTGAGATTG |
| U6 | AACAGTCTGACTTGTCCCTTC | Actin4-F | GAGGATATTCAGCCCCTTGTTTG |
| Universal reverse primer |
GCATAGACCTGAATGGCGGTAAGG GTGTGGTAGGCGAGACATTTTTTTTTTTTTTTTTTTT |
Actin4-R | CATCTTTCTGACCCATTCCAACC |