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. 2020 Jan 14;10:231. doi: 10.1038/s41598-019-57112-4

Table 2.

Best combination of housekeeping miRNAs for each group of samples yielded by software analyses.

Groups Best pair of housekeeping genes by software Best pair of housekeeping gene by visual inspection Best trio of housekeeping genes by visual inspection
NormFinder GeNorm RefFinder ΔCt method Bestkeeper DataAssist
All miR-25 + miR-26a miR-20a + miR-26a miR-20a + miR-26a miR-20a + miR-26a miR-26a + miR-191 miR-20a + miR-26a miR-20a + miR-26a miR-20a + miR-25 + miR-26a or miR-20a + miR-26a + miR-191
CY miR-20a + miR-26a miR-20a + miR-25 miR-20a + miR-25 miR-20a + miR-25 miR-25 + miR-191 miR-20a + miR-25 miR-20a + miR-25 miR-20a + miR-25 + miR-26a or miR-20a + miR-26a + miR-191
NC miR-20a + miR-26a miR-20a + miR-26a miR-20a + miR-26a miR-20a + miR-26a miR-20a + miR-191 miR-20a + miR-26a miR-20a + miR-26a miR-20a + miR-26a + miR-191
HT miR-20a + miR-26a miR-20a + miR-26a miR-20a + miR-26a miR-20a + miR-26a miR-20a + miR-191 miR-20a + miR-26a miR-20a + miR-26a miR-20a + miR-26a + miR-191
WT miR-20a + miR-26a miR-20a + miR-25 miR-25 + miR-26a miR-25 + miR-26a miR-20a + miR-25 miR-20a + miR-25 miR-20a + miR-25 miR-20a + miR-25 + miR-26a
SC miR-25 + miR-191 miR-25 + miR-191 miR-25 + miR-191 miR-25 + miR-191 miR-25 + miR-191 miR-25 + miR-191 miR-25 + miR-191
CO miR-20a + U6 miR-26a + miR-191 miR-20a + miR-26a miR-20a + miR-26a U6 + miR-25 miR-20a + miR-26a miR-20a + miR-26a miR-20a + miR-25 + miR-26a or miR-20a + miR-26a + miR-191 or miR-20a + miR-26a + U6

All, all samples; CY, cystic; NC, non-cystic; HT, haploinsuficient; WT, wild-type; SC, severely cystic phenotype; CO, severely cystic phenotype controls.