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. Author manuscript; available in PMC: 2020 Jan 14.
Published in final edited form as: Cancer Prev Res (Phila). 2008 Mar 19;1(4):233–240. doi: 10.1158/1940-6207.CAPR-07-0008

Table 1.

Genes up-regulated or down-regulated in mouse colonic epithelial cells after zebularine treatment

Biological process Gene symbol Probe ID Description
(A) Genes up-regulated in colonic epithelial cells after chronic zebularine treatment of the Min mice
Peptide cross-linking Tgm2 1455900_X_AT transglutaminase 2
1433428_X_AT
1437277_X_AT
Digestion Ppy 1420440_AT pancreatic polypeptide
Akr1b10 1448894_AT aldo-keto reductase family 1, member B10 (aldose reductase)
Fabp2 1418438_AT fatty acid binding protein 2, intestinal
Acute-phase response Reg3a 1448290_AT regenerating islet-derived 3α
1416297_S_AT
Reg3g 1448872_AT regenerating islet-derived 3 γ
Regulation of cell adhesion Tgm2 1455900_X_AT transglutaminase 2
1433428_X_AT
1437277_X_AT
Arginine metabolism Ddah1 1429298_AT dimethylarginine dimethylaminohydrolase 1
Otc 1420525_A_AT ornithine carbamoyltransferase
Urea cycle intermediate metabolism Ddah1 1429298_AT dimethylarginine dimethylaminohydrolase 1
Otc 1420525_A_AT ornithine carbamoyltransferase
Aldehyde metabolism Aldh1a1 1416468_AT aldehyde dehydrogenase 1 family, member A1
Akr1b10 1448894_AT aldo-keto reductase family 1, member B10 (aldose reductase)
(B) Genes down-regulated in colonic epithelial cells after chronic zebularine treatment of the Min mice
Peptide cross-linking Tgm3 1440150_AT transglutaminase 3
Digestion Slc15a1 1419343_AT solute carrier family 15 (oligopeptide transporter), member 1
Ctse 1418989_AT cathepsin E
Regulation of cell adhesion Lama3 1427512_A_AT laminin, α3
Iron ion homeostasis Slc40a1 1417061_AT solute carrier family 40 (iron-regulated transporter), member 1
1447227_AT

NOTE: Min mice were given 0.2 mg/mL zebularine dissolved in 3% sucrose-water daily for 113 ± 3 d. Mice were sacrificed on day 120. RNA from colonic epithelial cells was subjected to microarray analysis and analyzed using S-score algorithm (P < 10−5). An L2L array was used to obtain biological processes that were significantly affected (29).