Table 1.
Biological process | Gene symbol | Probe ID | Description |
---|---|---|---|
(A) Genes up-regulated in colonic epithelial cells after chronic zebularine treatment of the Min mice | |||
Peptide cross-linking | Tgm2 | 1455900_X_AT | transglutaminase 2 |
1433428_X_AT | |||
1437277_X_AT | |||
Digestion | Ppy | 1420440_AT | pancreatic polypeptide |
Akr1b10 | 1448894_AT | aldo-keto reductase family 1, member B10 (aldose reductase) | |
Fabp2 | 1418438_AT | fatty acid binding protein 2, intestinal | |
Acute-phase response | Reg3a | 1448290_AT | regenerating islet-derived 3α |
1416297_S_AT | |||
Reg3g | 1448872_AT | regenerating islet-derived 3 γ | |
Regulation of cell adhesion | Tgm2 | 1455900_X_AT | transglutaminase 2 |
1433428_X_AT | |||
1437277_X_AT | |||
Arginine metabolism | Ddah1 | 1429298_AT | dimethylarginine dimethylaminohydrolase 1 |
Otc | 1420525_A_AT | ornithine carbamoyltransferase | |
Urea cycle intermediate metabolism | Ddah1 | 1429298_AT | dimethylarginine dimethylaminohydrolase 1 |
Otc | 1420525_A_AT | ornithine carbamoyltransferase | |
Aldehyde metabolism | Aldh1a1 | 1416468_AT | aldehyde dehydrogenase 1 family, member A1 |
Akr1b10 | 1448894_AT | aldo-keto reductase family 1, member B10 (aldose reductase) | |
(B) Genes down-regulated in colonic epithelial cells after chronic zebularine treatment of the Min mice | |||
Peptide cross-linking | Tgm3 | 1440150_AT | transglutaminase 3 |
Digestion | Slc15a1 | 1419343_AT | solute carrier family 15 (oligopeptide transporter), member 1 |
Ctse | 1418989_AT | cathepsin E | |
Regulation of cell adhesion | Lama3 | 1427512_A_AT | laminin, α3 |
Iron ion homeostasis | Slc40a1 | 1417061_AT | solute carrier family 40 (iron-regulated transporter), member 1 |
1447227_AT |
NOTE: Min mice were given 0.2 mg/mL zebularine dissolved in 3% sucrose-water daily for 113 ± 3 d. Mice were sacrificed on day 120. RNA from colonic epithelial cells was subjected to microarray analysis and analyzed using S-score algorithm (P < 10−5). An L2L array was used to obtain biological processes that were significantly affected (29).