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. 2020 Jan 8;10:1303. doi: 10.3389/fgene.2019.01303

Table 4.

AUROC of different deep learning-based methods by considering gRNA sequence only and incorporating both gRNA sequence and epigenetic features.

Model HCT116 HEK293T HELA HL60 Average
(A) Sequence-only
CNN-SVR 0.938 0.976 0.930 0.928 0.943
DeepCRISPR 0.887 0.474 0.788 0.584 0.683
Seq-deepCpf1 0.931 0.976 0.925 0.920 0.938
(B) Sequence composition and epigenetic features
CNN-SVR 0.939 0.979 0.932 0.938 0.947
DeepCRISPR 0.919 0.506 0.820 0.643 0.722