Table 2.
Gene | Primer | Sequence (5′–3′) | Annealing T (°C) |
---|---|---|---|
16S rDNA | 16SF | CGGGGGAAAAATTTATTGCT | 55 |
16SR | AGCTGTAATACAGAAAGTAAA | ||
wAlbA-wsp | WAF | CCAGCAGATACTATTGCG | 55 |
WAR | AAAAATTAAACGCTACTCCA | ||
wAlbB-wsp | WBF | AAGGAACCGAAGTTCATG | 55 |
WBR | AAAAATTAAACGCTACTCCA | ||
wsp | 81 | TGGTCCAATAAGTGATGAAGAAAC | 53 |
691 | AAAAATTAAACGCTACTCCA | ||
FtsZ | ftsZ-F | TACTGACTGTTGGAGTTGTAACTAAGCCGT | 58 |
ftsZ-R | TGCCAGTTGCAAGAACAGAAACTCTAACTC | ||
28S rRNA | 28F | TACCGTGAGGGAAAGTTGAAA | 55 |
28R | AGACTCCTTGGTCCGTGTTT | ||
cox1 | cox1F | TTTACAATTTATCGCCTAAACTTC | 55 |
cox1R | CATTGCACTAATCTGCCATA | ||
cox1f | GGGGGAGACCCTATTTTATA | 55 | |
cox1r | TAAACTTCAGGGTGACCAAAAAATCA | ||
wAlbAq-wsp | qAF | GGGTTGATGTTGAAGGAG | 55 |
qAR | CACCAGCTTTTACTTGACC | ||
wAlbBq-wsp | qBF | ACGTTGGTGGTGCAACATTTG | 58 |
qBR | TAACGAGCACCAGCATAAAGC | ||
RPS | RPS6-F | CGTCGTCAGGAACGTATTCG | 55 |
RPS6-R | TCTTGGCAGCCTTGACAGC |
Note: Primers cox1f/cox1r were used for sequencing
Abbreviation: T, temperature