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. 2020 Jan 15;40(3):496–508. doi: 10.1523/JNEUROSCI.1500-19.2019

Table 8.

Prevalence (%) of neurons with significant expression of genes that covary with fast-firing capacity in MVN cell types

Pre-oculomotor Pre-cerebellar Unknown Commissural Cerebellar target Local interneuron
Cacna1a 100 95 100 100 85 86
Cplx1 100 100 100 100 100 100
Kcna1 100 100 50 87 85 47
Kcnc1 100 100 100 100 100 99
Kcng4 100 90 0 90 15 31
Kcnh2 100 95 100 100 92 91
Nefh 100 100 100 89 54 33
Nefl 100 100 100 100 100 100
Nefm 100 100 100 100 54 72
Scn1a 100 100 83 97 100 95
Scn1b 100 100 100 100 100 100
Scn4b 100 100 33 80 0 5
Scn8a 100 100 100 100 92 92
Syt2 100 95 33 70 15 1
Vamp1 100 100 100 100 100 100

Of 134 candidate genes the transcript levels of which potentially covary with fast-firing capacity of MVN neurons, 15 genes were confirmed for highly correlative expression (average r > 0.6) with the fast-firing ion channels across individual MVN samples. The percentage of cells showing significant expression of the genes are shown for each cell type. Cacna1a and Kcng4 are included in the list because, although the microarray failed to detect them, the high correlation of its expression to the fast-firing genes were confirmed at the single-cell level (Figure 4A,B). For Cplx1, Nefh, Nefl, Nefm, and Vamp1, 102 cells were examined (pre-oculomotor, n = 20; pre-cerebellar, n = 19; unknown, n = 6; commissural, n = 26; cerebellar target, n = 13; local interneuron, n = 18). For all the other genes, 167 cells were examined (pre-oculomotor, n = 21; pre-cerebellar, n = 20; unknown, n = 6; commissural, n = 30; cerebellar target, n = 13; local interneuron, n = 77).