Table 8.
Pre-oculomotor | Pre-cerebellar | Unknown | Commissural | Cerebellar target | Local interneuron | |
---|---|---|---|---|---|---|
Cacna1a | 100 | 95 | 100 | 100 | 85 | 86 |
Cplx1 | 100 | 100 | 100 | 100 | 100 | 100 |
Kcna1 | 100 | 100 | 50 | 87 | 85 | 47 |
Kcnc1 | 100 | 100 | 100 | 100 | 100 | 99 |
Kcng4 | 100 | 90 | 0 | 90 | 15 | 31 |
Kcnh2 | 100 | 95 | 100 | 100 | 92 | 91 |
Nefh | 100 | 100 | 100 | 89 | 54 | 33 |
Nefl | 100 | 100 | 100 | 100 | 100 | 100 |
Nefm | 100 | 100 | 100 | 100 | 54 | 72 |
Scn1a | 100 | 100 | 83 | 97 | 100 | 95 |
Scn1b | 100 | 100 | 100 | 100 | 100 | 100 |
Scn4b | 100 | 100 | 33 | 80 | 0 | 5 |
Scn8a | 100 | 100 | 100 | 100 | 92 | 92 |
Syt2 | 100 | 95 | 33 | 70 | 15 | 1 |
Vamp1 | 100 | 100 | 100 | 100 | 100 | 100 |
Of 134 candidate genes the transcript levels of which potentially covary with fast-firing capacity of MVN neurons, 15 genes were confirmed for highly correlative expression (average r > 0.6) with the fast-firing ion channels across individual MVN samples. The percentage of cells showing significant expression of the genes are shown for each cell type. Cacna1a and Kcng4 are included in the list because, although the microarray failed to detect them, the high correlation of its expression to the fast-firing genes were confirmed at the single-cell level (Figure 4A,B). For Cplx1, Nefh, Nefl, Nefm, and Vamp1, 102 cells were examined (pre-oculomotor, n = 20; pre-cerebellar, n = 19; unknown, n = 6; commissural, n = 26; cerebellar target, n = 13; local interneuron, n = 18). For all the other genes, 167 cells were examined (pre-oculomotor, n = 21; pre-cerebellar, n = 20; unknown, n = 6; commissural, n = 30; cerebellar target, n = 13; local interneuron, n = 77).