Figure 4.
Phylogenetic reconstructions using ASTRAL (A, C) and using IQ-TREE (B, D) of the relationships in the C4 Cyperus clade inferred for (A, B) dataset 1, i.e., 38 samples enriched with the Angiosperms-353 probes, and (C, D) dataset 2, i.e., 9 samples enriched with the Cyperaceae-specific probes. The ASTRAL trees show local posterior probability values and pie charts visualizing quartet support values at the nodes (blue = agreeing loci; red = disagreeing loci; gray = uninformative), while the IQ-TREE trees show BS/gCF/sCF values at the nodes.