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. 2018 Nov 1;11(11):5441–5449.

Table 1.

Allele frequencies of candidates SNPs examined in IL-1 gene among cases and controls

SNP Gene Chr Position Allele Minor allele frequency HWE P value OR (95% CI) P a

Case Control
rs3783550 IL-1α 2q13 113532885 T/G 0.410 0.333 0.7956 1.39 (1.10-1.76) 0.021*
rs3783546 IL-1α 2q13 113534830 C/G 0.420 0.332 0.8963 1.46 (1.15-1.85) 0.006*
rs2856838 IL-1α 2q13 113539972 A/G 0.297 0.240 0.6332 1.34 (1.03-1.73) 0.040*
rs1609682 IL-1α 2q13 113540205 T/G 0.410 0.334 0.7957 1.38 (1.09-1.75) 0.022*
rs3783521 IL-1α 2q13 113543577 G/A 0.430 0.333 0.7956 1.51 (1.19-1.91) 0.002*
rs2853550 IL-1β 2q13 113587121 A/G 0.090 0.092 0.2923 0.98 (0.66-1.45) 0.308
rs1143643 IL-1β 2q13 113588302 C/T 0.527 0.470 0.7276 1.26 (1.00-1.58) 0.128
rs3136558 IL-1β 2q13 113591275 G/A 0.372 0.379 0.8057 0.97 (0.77-1.22) 0.928
rs1143630 IL-1β 2q13 113591655 T/G 0.162 0.155 0.5060 1.05 (0.77-1.43) 0.936
rs1143627 IL-1β 2q13 113594387 G/A 0.561 0.465 0.0470 1.47 (1.17-1.85) < 0.001*
rs16944 IL-1β 2q13 113594867 A/G 0.561 0.455 0.0803 1.53 (1.22-1.92) < 0.001*
rs1143623 IL-1β 2q13 113595829 G/C 0.487 0.373 0.0359 1.59 (1.26-2.00) < 0.001*

SNP: Single nucleotide polymorphism; OR = Odds ratio; 95% CI = 95% confidence interval; HWE: Hardy-Weinberg equilibrium.

*

P < 0.05 indicates statistical significance;

a

P values were calculated using Pearson Chi-square test/Fisher’s exact test.