Table 2.
Information on 21 clustered trees using treespace, with five principal components and 100 cut-off distance.
| Cluster | Clustered Trees | No. of Trees |
|---|---|---|
| 1 | accD; ndhG; psbB; rpl20; rpl32; rpl33; rps19; accD_psaI; psaJ_rpl33; trnS_trnG; ycf4_cemA; trnK_intron2 | 12 |
| 2 | atpA; ccsA; ndhA; ndhH; atpF_atpH; petA_psbJ; rpoB_trnC; rps15_ycf1; rps16_trnQ; trnE_trnT; trnT_trnL; rpoC1_intron | 12 |
| 3 | atpE; rps15; ndhH_rps15; ndhJ_ndhK; trnW_trnP | 5 |
| 4 | atpF; petG; psbH; psbT; ndhG_ndhI; petB_petD; psbA_trnK; trnN_ycf1 | 8 |
| 5 | atpH; ndhC; psaI; psbE; psbF; psbJ; rpl2; rpl16; rpl23; ccsA_ndhD; petL_petG; trnA_rrn23; trnV_rrn16 | 13 |
| 6 | atpI; ndhD_psaC; ndhF_rpl32; rpl14_rpl16; rps19_trnH; rrn5_trnR; trnS_rps4 | 7 |
| 7 | cemA; petB; rbcL; rpl22; rps3; rps18; ndhC_trnV; rps11_rpl36; rps14_psaB; trnK_rps16; trnR_trnN | 11 |
| 8 | clpP; rps11; trnI_intron | 3 |
| 9 | matK; ndhB; ndhI; rpl14; rps7; rps14; psbE_petL; psbH_petB; psbJ_psbL; rps4_trnT; trnG_trnfM; trnL_ndhB; trnL_trnF; clpP_intron1; petB_intron; trnG_intron | 16 |
| 10 | ndhD; ndhF; ndhK; petA; psaA; rpoB; rpoC1; rpoC2; ycf1; ycf2; atpH_atpI; trnF_ndhJ; trnQ_psbK; trnS_psbZ; trnT_psbD; ycf3_trnS; atpF_intron; ndhA_intron; petD_intron; rpl16_intron; rps16_intron; Consensus tree of species trees | 22 |
| 11 | ndhE; ndhJ; psbC; rpoA; rps16; clpP_psbB; rps2_rpoC2; ycf2_trnL | 8 |
| 12 | petN; psbL; psbN; rps12_intron | 4 |
| 13 | psaB; psbA; rps8; psbM_trnD; rrn16_trnI; trnP_psaJ | 6 |
| 14 | psaC; psaJ; psbM; ndhB_rps7; psbN_psbH; rpl23_trnI | 6 |
| 15 | psbD; psaA_ycf3; rps12_trnV; trnV_trnM; ndhB_intron; rpl2_intron | 6 |
| 16 | psbK; psbZ; rps12; psbC_trnS; rrn4.5_rrn5; trnA_intron | 6 |
| 17 | rps2; rps4; trnV_intron | 3 |
| 18 | ycf4; petG_trnW; petN_psbM; trnC_petN; ycf3_intron2 | 5 |
| 19 | atpI_rps2; cemA_petA; ndhE_ndhG; rpl32_trnL; rpl33_rps18; rpl36_rps8; trnD_trnY | 7 |
| 20 | psbI_trnS; rps8_rpl14; trnR_atpA | 3 |
| 21 | rpl16_rps3; trnfM_rps14; trnM_atpE | 3 |