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. 2019 Nov 20;8(4):251. doi: 10.3390/pathogens8040251

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© 2019 by the authors.

Licensee MDPI, Basel, Switzerland. This article is an open access article distributed under the terms and conditions of the Creative Commons Attribution (CC BY) license (http://creativecommons.org/licenses/by/4.0/).

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A maximum clade credibility tree based on complete E2 sequences of CSFVs. Rates of nucleotide substitution per site and per year, and the most recent common ancestor (tMRCA), were estimated using a Bayesian MCMC approach. Each dataset was simulated with the following options: generation = 100,000,000, burn-in of 10%, and ESSs > 200. The confidence of the phylogentic analysis is present to numbers representing branch length (time) above the nodes. The yellow block comprises LOM strains within Genotype 1. The light green line denotes 8 commercial LOM vaccine strains. The blue line denotes 5 Jeju LOM strains (2004–2007) and the red line denotes 16 Jeju LOM strains (2014–2018).