Table 6.
Selected transcripts up-regulated in response of the roots to water deprivation. Analysis of multiple RNAseq experiments with meta-analytical approach of Genevestigator (details in Supplementary Figures S1–S6).
| Ensembl Gene/Gene ID | UniProtKB Function/Process |
|---|---|
| Transcription Factors | |
| Transcription initiation factor TFIID subunit 10/ TraesCS7B02G097300 |
DNA-templated transcription, mediating promoter responses to various activators and repressors |
| Ethylene responsive transcription factor 5a/ TraesCS5B02G214400 | |
| BZIP transcription factor B/TraesCS6B02G364000 | DNA binding, ABA signaling |
| DRF-like transcription factor DRFL2a/TraesCS6B02G331000 | DNA binding, transcription regulation |
| DRF-like transcription factor DRFL2b/TraesCS6D02G281200 | |
| DRF-like transcription factor DRFL2c/TraesCS6A02G301900 | |
| Drought-responsive factor-like transcription factor DRFL1a/TraesCS5D02G200900 | |
| WXPL1B transcription factor/TraesCS5B02G193200 | |
| R2R3-MYB transcription factor TaMyb1D/TraesCS5D02G335700 | DNA binding, cell differentiation |
| Transcription factor LIM/TraesCS5D02G115000 | Actin filament binding, metal ion binding, mRNA binding, actin filament bundle assembly |
| Transcription initiation factor IIA subunit 2/TraesCS1D02G024600 | Transcription initiation from RNA polymerase II promoter |
| MYB transcription factor 80/TraesCS2A02G206400 | Transcription regulatory region DNA binding, cell differentiation |
| MYB transcription factor 74/TraesCS2D02G209600 | |
| MIKC-type MADS-box transcription factor WM30/TraesCS2A02G337900 | DNA binding, transcription factor activity, protein dimerization activity, RNA polymerase II regulatory region |
| MYB transcription factor SM152-3/TraesCS7A02G179900 | Transcription regulatory region DNA binding, cell differentiation |
| MYB transcription factor SM152-1/TraesCS7B02G085100 | |
| MYB transcription factor SM152-2/TraesCS7D02G181400 | |
| MYB13 transcription factor/TraesCS3A02G535100 | |
| R2R3 MYB transcriptional factor/TraesCS7D02G272400 | |
| NAC transcription factor 6A/TraesCS5B02G054200 | DNA binding, transcription regulation |
| NAC transcription factor/TraesCS5D02G059700 | |
| MYB-related protein/TraesCS3D02G540600 | Sequence-specific DNA binding, transcription regulation |
| MYB protein/TraesCS3B02G612200 | |
| R2R3-MYB protein/TraesCS3A02G108000 | Sequence-specific DNA binding, cell differentiation |
| NAC domain-containing protein 2a-like protein/TraesCS5B02G480900 | Sequence-specific DNA binding, transcription regulation |
| NAC transcription factor 6A/TraesCS3A02G406000 | |
| NAC transcription factor 6B/TraesCS3B02G439600 | |
| NAC domain-containing protein 18/TraesCS7D02G263800 | |
| RNAC1 transcription factor/TraesCS2D02G324700 | |
| WRKY transcription factor/TraesCS3B02G324400 | |
| WRKY80 transcription factor/TraesCS6A02G146900 | |
| Auxin | |
| Auxin-responsive protein/TraesCS4B02G070300 | Uncharacterized protein |
| Auxin-responsive protein/TraesCS4A02G245100 | |
| Auxin-responsive protein/TraesCS4D02G069100 | |
| Auxin-responsive protein/TraesCS5D02G069300 | |
| Auxin-responsive protein/TraesCS5B02G058500 | |
| Auxin-responsive protein/TraesCS5D02G392000 | |
| Auxin-responsive protein/TraesCS5A02G382600 | Auxin-induced protein, auxin-activated signaling pathway |
| Auxin-responsive protein/TraesCS5A02G058700 | |
| Auxin-responsive protein/TraesCS5B02G386800 | Uncharacterized protein |
| Auxin-responsive protein/TraesCS5D02G069200 | Auxin-induced protein, auxin-activated signaling pathway |
| Auxin efflux carrier component/TraesCS7B02G095500 | Auxin efflux carrier, auxin-activated signaling, transmembrane transport |
| Auxin-responsive protein/TraesCS5D02G388200 | Auxin-responsive protein |
| Auxin-responsive protein/TraesCS7B02G256100 | Uncharacterized protein |
| Auxin-responsive protein/TraesCS7A02G371500 | |
| Auxin-responsive protein/TraesCS5B02G381800 | |
| Cytokinin | |
| Cytokinin riboside 5′-monophosphate phosphoribohydrolase/TraesCS3A02G251500 | Hydrolase activity cytokinin, biosynthetic process |
| Mitogen-activated Protein Kinase | |
| Mitogen-activated protein kinase/TraesCS7A02G422500 | ATP binding, cell division, response to abscisic acid, ethylene, hydrogen peroxide, priming of cellular response to stress |
| Mitogen-activated protein kinase/TraesCS7A02G111300 | |
| Abscisic Acid | |
| HVA22-like protein/TraesCS3A02G283300 | Receptor expression-enhancing protein |
| HVA22-like protein/TraesCS4A02G080700 | |
| Abscisic stress-ripening protein/TraesCS4D02G109500 | |
| HVA22-like protein/TraesCS2B02G313000 | Uncharacterized protein |
| HVA22-like protein/TraesCS2D02G294700 | |
| HVA22-like protein/TraesCS2A02G296800 | Receptor expression-enhancing protein |
| Ethylene | |
| Transmembrane 9 superfamily member/TraesCS6D02G265500 | Multi-pass membrane protein, signal peptide, protein localization to membrane |
| Transmembrane 9 superfamily member/TraesCS6B02G313900 | |
| Ethylene receptor/TraesCS6A02G399400 | Ethylene binding, signaling pathway |
| Antioxidative Enzymes | |
| Superoxide dismutase/TraesCS2A02G537100 | Catalyze the conversion of superoxide radicals to molecular oxygen, metal ion binding, stress responses |
| Catalase/TraesCS7B02G473400 | Heme binding, metal ion binding, reactive oxygen species detoxification, hydrogen peroxide catabolic process, response to abscisic acid and salicylic acid |
| Catalase/TraesCSU02G105300 | |
| Dopamine beta-monooxygenase/TraesCS3B02G300400 | Oxidation–reduction process, metal ion binding, electron transport, flavin adenine dinucleotide binding, auxin biosynthesis process, NADP binding |
| Glutathione reductase/TraesCS6B02G423100 | Oxidoreductase activity, detoxification of ROS, glutathione metabolism |
| Superoxide dismutase [Cu–Zn]/TraesCS4D02G242800 | Catalyze the conversion of superoxide radicals to molecular |
| Flavin-containing monooxygenase/TraesCS4B02G370200 | Oxidation–reduction process, flavin adenine dinucleotide binding, NADP binding, auxin biosynthetic process |
| Flavin-containing monooxygenase/TraesCS1A02G211100 | |
| Flavin-containing monooxygenase/TraesCS5B02G531000 | |
| Flavin-containing monooxygenase/TraesCS4A02G313200 | |
| Flavin-containing monooxygenase/TraesCS7D02G538300 | |
| Flavin-containing monooxygenase/TraesCS7A02G552000 | |
| Flavin-containing monooxygenase/TraesCS2D02G012100 | |
| Flavin-containing monooxygenase/TraesCS2B02G010100 | |
| Flavin-containing monooxygenase/TraesCS2A02G011500 | |
| Flavin-containing monooxygenase/TraesCS4B02G366800 | |
| Flavin-containing monooxygenase/TraesCS4D02G360900 | |
| Flavin-containing monooxygenase/TraesCS5A02G534500 | |
| Flavin-containing monooxygenase/TraesCS7D02G538700 | |
| Flavin-containing monooxygenase/TraesCS5D02G355700 | |
| Flavin-containing monooxygenase/TraesCS5B02G350700 | |
| Flavin-containing monooxygenase/TraesCS3A02G010900 | |
| Flavin-containing monooxygenase/TraesCS5A02G349300 | |
| Flavin-containing monooxygenase/TraesCS4D02G269000 |