Table 2.
Candidates alleles analysis in N. gonorrhoeae (4198 strains in PubMLST).
| Gene | Total Alleles | Frequency 1 | Distribution 2 (% of 4198 Strains) |
p-Distance | Polymorphic Sites (Total) | Polymorphic Sites 3 | ||
|---|---|---|---|---|---|---|---|---|
| Allele | # of Strains | Allele | Non-Synonimous Mutations | |||||
| ngo0416 (NEIS0782) | 6 | 17 | 3069 | 73.7 | 0.006 | 5 | - | - |
| 26 | 124 | 2.9 | - | - | ||||
| ngo0690 (NEIS1164) | 17 | 7 | 3332 | 79.3 | 0.01 | 27 | - | - |
| 32 | 815 | 19.4 | 32 | S37R | ||||
| ngo0948 (NEIS0906) | 55 | 12 | 2354 | 57 | 0.005 | 109 | - | - |
| 28 | 363 | 8.6 | 28 | A319R | ||||
| 32 | 324 | 7.7 | 32 | I18M, T19K | ||||
| 214 | 248 | 5.9 | 214 | Q49R | ||||
| ngo1043 (NEIS2446) | 27 | 57 | 2720 | 64.7 | 0.01 | 26 | - | - |
| 64 | 691 | 16.4 | 64 | V65A | ||||
| 58 | 283 | 6.7 | 58 | V65A, A116T | ||||
| 80 | 262 | 6.2 | 80 | V65A | ||||
| ngo1215 (NEIS1474) | 13 | 13 | 3817 | 91 | 0.012 | 27 | 13 | x143P |
| 16 | 273 | 7 | 16 | x143S | ||||
| ngo1701 (NEIS2720) | 11 | 1 | 3379 | 80.4 | 0.005 | 10 | - | - |
| 2 | 803 | 19.1 | 2 | E126A | ||||
1 Most frequent alleles in the highest number of strains; 2 Percent of strains expressing the high frequency alleles1 within the total number of isolates. Data collected from PubMLST [61]; 3 Polymorphisms in the most frequent alleles1.