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. 2020 Jan 14;30(2):481–496.e6. doi: 10.1016/j.celrep.2019.12.028
REAGENT or RESOURCE SOURCE IDENTIFIER
Antibodies

FITC anti-mouse KRLG1 TONBO biosciences Cat# 35-5893; RRID:AB_2621718
FITC anti-mouse IFN gamma TONBO Biosciences Cat# 35-7311-U100; RRID:AB_2621724
FITC anti-mouse CD4 TONBO Biosciences Cat# 35-0031-U100; RRID:AB_2621665
FITC anti-mouse CD8a BioLegend Cat# 100706; RRID:AB_312745
FITC anti-mouse FOXP3 eBioscience Cat# 11-5773-82; RRID:AB_465243
PE anti-mouse CTLA-4 eBioscience Cat# 12-1522-82; RRID:AB_465243
PE anti-mouse F4/80 eBioscience Cat# 12-4801-82; RRID:AB_465923
PE anti-mouse CD4 BioLegend Cat# 100407; RRID:AB_312692
PE anti-mouse CD8a eBioscience Cat# 12-0081-81; RRID:AB_465529
PE anti-mouse FOXP3 TONBO bioscience Cat# 50-5773-U100; RRID:AB_2621797
PE anti-mouse CD274 eBioscience Ca# 12-5982-81; RRID:AB_466088
PE anti-human/mouse CD44 eBioscience Cat# 12-0441-81; RRID:AB_465663
PerCP-Cy5.5 anti-mouse Ki67 BioLegend Cat# 652424; RRID:AB_2629531
PerCP-Cy5.5 anti-mouse Ly6G BioLegend Cat# 127616; RRID:AB_1727563
PeCy7 anti-mouse Granzyme B eBioscience Cat# 25-8898-80; RRID:AB_10853338
PeCy7 anti-mouse GITR BD Pharmigen Cat# 558140; RRID:AB_647252
PeCy7 anti-mouse CD11b BD Pharmigen Cat# 552850; RRID:AB_394491
PeCy7 anti-mouse NKp46 eBioscience Cat# 25-3351-82; RRID:AB_394491
PeCy7 anti-mouse CD8a eBioscience Cat# 25-0081-81; RRID:AB_469583
PeCy7 anti-mouse CD4 TONBO bioscience Cat# 60-0041-U100; RRID:AB_469583
PeCy7 anti-mouse CD80 eBioscience Cat# 25-0801-82; RRID:AB_2573370
eFluor450 anti-mouse IL-2 eBioscience Cat# 48-7021-82; RRID:AB_1944462
vFluor450 anti-mouse CD4 TONBO bioscience Cat# 75-0042-U100; RRID:AB_2621928
eFluor450 anti-mouse CD8a eBioscience Cat# 48-0081-82; RRID:AB_1272198
BV605 anti-mouse Ly6C BioLegend Cat# 128036; RRID:AB_2562353
BV605 anti-mouse CXCR3 BioLegend Cat# 126523; RRID:AB_2561353
BV650 anti-mouse CD8a eBioscience Cat# 100555; RRID:AB_2561353
BV650 anti-mouse CD4 BioLegend Cat# 100555; RRID:AB_2562529
BV650 anti-mouse CD11b BioLegend Cat# 101259; RRID:AB_2566568
BV711 anti-mouse CD11b BioLegend Cat# 101242; RRID:AB_2563310
BV711 anti-mouse CD4 BioLegend Cat# 100557; RRID:AB_2562607
BV711 anti-mouse CD8a BioLegend Cat# 100759; RRID:AB_2563510
BV785 anti-mouse MHCII I-A/I-E BioLegend Cat# 107646; RRID:AB_313317
BV785 anti-mouse B220 BioLegend Cat# 103246; RRID:AB_2563256
APC anti-mouse CD4 eBioscience Cat# 17-0042-82; RRID:AB_469323
APC anti-mouse FOXP3 eBioscience Cat# 20-0191-U100; RRID:AB_2621561
APC anti-mouse MHCI H-2Kd,H-2Dd eBioscience Cat# 17-5998-82; RRID:AB_2573250
APC anti-mouse TNF alpha eBioscience Cat# 506308; RRID:AB_315429
APC anti-mouse CD25 eBioscience Cat# 20-0251-U100; RRID:AB_2621567
APC anti-mouse CD86 eBioscience Cat# 17-0862-81; RRID:AB_469418
AlexaFluor647 anti-mouse CCR2 (CD192) BioLegend Cat# 150604; RRID:AB_2566140
Vinculin mouse monoclonal Santa Cruz Biotechnology Cat# SC-73614; RRID:AB_1131294
p53 mouse monoclonal antibody Cell Signaling Technology Cat# 2524; RRID:AB_331743
InVivoPlus mouse IgG2a isotype control BioXCell Cat# BP0085; RRID:AB_1107771
InVivo monoclonal anti mouse CSF1R BioXCell Cat#BE0213; RRID:AB_466565
InVivo monoclonal anti-CD25 BioXCell Cat# BE0012; RRID:AB_1107619
Anti-mouse CD28 Functional grade purified eBioscience Cat# 16-0281-86; RRID:AB_468923
Anti-mouse CD3e Functional grade purified eBioscience Cat# 16-0031-86; RRID:AB_468849
IRDye® 800CW Donkey anti-mouse Li-Cor Cat# 926-32212; RRID:AB_621847
IRDye® 680LT Donkey anti-Rabbit Li-Cor Cat# 926-68023; RRID:AB_10706167

Chemicals, Peptides, and Recombinant Proteins

Recombinant Murine Il-2 Peprotech Cat# 212-12
Ovalbumin peptide 257-364 Francis Crick Institute N/A
Ovalbumin peptide 323-339 Francis Crick Institute N/A
Recombinant Murine M-CSF Peprotech Cat# 315-02

Critical Commercial Assays

Mouse M-CSF ELISA Kit RayBio ® Cat# ELM-MCSF
Mouse G-CSF ELISA Kit RayBio ® Cat# ELM-GCSF
Mouse CXCL1/KC ELISA Kit OriGene Techologies, Inc Cat# EA100460
Mouse Cytokine Array Panel A - Proteome Profiler R&D systems ® Cat# ARY006
Mouse CCL2 Uncoated ELISA Kit Invitrogen Cat# 99-7391-22
Mouse MIP1 alpha (CCL3) Uncoated ELISA Kit Theromo Fisher Scientific Cat# 88-56013-22
Mouse LIX ELISA Kit RayBio ® Cat# ELM-LIX
ProcartaPlex Mouse Cytokine & Chemokine Panel 1 (26 plex) Invitrogen eBioscience EPX260-26088-901
LEGEND MAX Mouse CCL11 ELISA Kit BioLegend Cat# 4438907
High capacity cDNA reversts transcription kit AppliedBiosystems Cat# 4368814
RNeasy ® Mini Kit QIAGEN Cat# 157029548
RNase Free and DNase set QIAGEN Cat# 79254

Deposited Data

PAAD - TCGA TCGA https://gdac.broadinstitute.org/; RRID:SCR_003193

Experimental Models: Cell Lines

Phoenix-ECO ATCC® Cat# CRL-3214; RRID:CVCL_H717
KC1 Pdx1-cre; LSL-KRasG12D Beatson Institute for Cancer Research N/A
KC3 Pdx1-cre; LSL-KRasG12D Beatson Institute for Cancer Research N/A
KC3 Pdx1-cre; LSL-KRasG12D Beatson Institute for Cancer Research N/A
KFC1 Pdx1-cre; LSL-KrasG12D; Trp53fl/+ Beatson Institute for Cancer Research N/A
KFC2 Pdx1-cre; LSL-KrasG12D; Trp53fl/+ Beatson Institute for Cancer Research N/A
KFC3 Pdx1-cre; LSL-KrasG12D; Trp53fl/+ Beatson Institute for Cancer Research N/A
ID8 Walton et al., 2016 N/A
ID8-p53KO Walton et al., 2016 N/A
iKRAS;p53f/+ Ying et al., 2012 N/A

Experimental Models: Organisms/Strains

C57Bl6/J mice females (6-10weeks) Charles River Laboratories CR: 632
CD1 nude- Crl:CD1-Foxn1nu./nu. females (6-10weeks) Charles River Laboratories CR: 087
FVB/NCrl females (6-10weeks) Charles River Laboratories CR: 207

Oligonucleotides

Primers for qPCR T cell cytokines See Table 1 This paper N/A
Trp53 gRNA/Cas9 Walton et al., 2016 N/A

Recombinant DNA

pBABE-iRFP plasmid Hock et al., 2014 N/A
pCl-neo-mOVA Yang et al., 2010 Addgene Cat# 25099; RRID:Addgene_25099
MIGR1 Pear et al., 1998 Addgene Cat# 27490; RRID:Addgene_27490

Software and Algorithms

ImageJ Schneider et al., 2012 https://imagej.nih.gov/ij/; RRID:SCR_001935
Image Studio v5 Li-Cor N/A
FlowJo version 9.0 FlowJo https://www.flowjo.com/solutions/flowjo/downloads; RRID:SCR_008520
survival package version 2.41-3 https://cran.r-project.org/web/packages/surviva/index.html
R version 3.4.3 RStudio http://www.R-project.org; RRID:SCR_000432
Prism Version 7 GraphPad https://www.graphpad.com/scientific-software/prism/; RRID:SCR_002798