Table 2.

Number of sequence reads derived from rectum samples

Treatment	Mice	Pairs of raw reads	Merged reads	Reads in OTUs
Untreated	GKf/f	108,219	93,088	57,378
		119,144	104,912	64,302
		132,543	116,104	56,395
	Villin-Cre;GKf/f	166,120	141,459	71,663
		177,145	150,617	88,569
		153,489	130,854	65,596
DSS-treated	GKf/f	158,088	140,514	82,872
		162,429	146,540	85,937
		146,585	129,640	72,774
		96,962	91,832	66,395
		82,258	76,967	51,798
		67,262	64,477	47,707
	Villin-Cre;GKf/f	146,398	129,707	76,916
		149,141	133,210	70,468
		129,604	117,091	60,096
		64,784	61,357	40,852
		58,762	55,256	41,103
		69,251	64,639	40,453
Total		2,188,184	1,948,264	1,141,274