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. 2020 Jan 16;10:504. doi: 10.1038/s41598-020-57544-3

Table 2.

Mutations detected in 77 gastric tumours by Ion AmpliSeq Cancer Hotspot Panel v2.

Gene Genetic variant rsID Variant position according to hg19 Pathogenicity (ClinVar) MAF (gnomAD) Number of cases
PIK3CA

NM_006218.3:

c.1633G > A:

p.E545K

rs104886003 chr3:178936091 Pathogenic A = 0.000004 1
PIK3CA

NM_006218.3:

c.3140 A > G:

p.H1047R

rs121913279 chr3:178952085 Pathogenic G = 0.000004 1
EGFR

NM_005228.3:

c.874 G > A:

p.V292M

rs150549265 chr7:55221830 A = 0.000004 1
KIT

NM_000222.2: c.G148T:

p.V50L

rs200950545 chr4:55561758 Uncertain significance T = 0.000033 1
KDR

NM_002253: c.G2678C:

p.G893A

chr4:55962446 1
RB1

NM_000321.2:

c.2056 C > A:

p.H686N

chr13:49033919 1
RB1

NM_000321.2:

c.2002C > T:

p.R668C

rs369755801 chr13:49033865 T = 0.000028 1
RB1

NM_000321.2:

c.1690C > T:

p.L564F

chr13:48955574 1
CDKN2A

NM_000077.4:

c.307 C > T:

p.R103W

rs767642535 chr9:21971051 Uncertain significance A = 0.000004 1
SMO

NM_005631.4:

c.618 G > A:

p.W206*

rs751636409 chr7:128845124 A = 0.000008 1
KRAS

NM_0.004985.4:

c.35 G > A:

p.G12D

rs121913529 chr12:25398284 Pathogenic A = 0.000004 1